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CAZyme Information: MGYG000004109_00816

You are here: Home > Sequence: MGYG000004109_00816

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; ; ; ;
CAZyme ID MGYG000004109_00816
CAZy Family GH36
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
635 71702.75 6.4988
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004109 2073923 MAG United Kingdom Europe
Gene Location Start: 3570;  End: 5477  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004109_00816.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam05691 Raffinose_syn 1.99e-80 59 624 71 718
Raffinose synthase or seed imbibition protein Sip1. This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1<-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (EC:2.4.1.82) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway. Raffinose family oligosaccharides (RFOs) are ubiquitous in plant seeds and are thought to play critical roles in the acquisition of tolerance to desiccation and seed longevity. Raffinose synthases are alkaline alpha-galactosidases and are solely responsible for RFO breakdown in germinating maize seeds, whereas acidic galactosidases appear to have other functions. Glycoside hydrolase family 36 can be split into 11 families, GH36A to GH36K. This family includes enzymes from GH36C.
PLN02219 PLN02219 6.77e-63 59 621 68 697
probable galactinol--sucrose galactosyltransferase 2
PLN02684 PLN02684 1.46e-62 59 600 68 672
Probable galactinol--sucrose galactosyltransferase
PLN02355 PLN02355 4.79e-60 53 626 62 700
probable galactinol--sucrose galactosyltransferase 1
PLN02711 PLN02711 1.61e-48 59 595 91 698
Probable galactinol--sucrose galactosyltransferase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AEE97182.1 2.96e-145 50 625 92 651
AIQ70306.1 8.57e-132 62 619 119 655
QHW35511.1 4.92e-129 43 616 119 666
QIZ10346.1 8.24e-127 60 631 122 677
AYQ72202.1 4.87e-124 57 620 141 689

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q94A08 4.23e-58 59 621 68 696
Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=RFS2 PE=2 SV=2
Q84VX0 2.25e-57 34 609 40 684
Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=RFS1 PE=2 SV=1
Q8RX87 3.98e-57 59 525 68 568
Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana OX=3702 GN=RFS6 PE=2 SV=2
Q5VQG4 1.24e-49 53 595 90 701
Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica OX=39947 GN=RFS PE=1 SV=1
Q8VWN6 1.39e-47 53 609 104 733
Galactinol--sucrose galactosyltransferase OS=Pisum sativum OX=3888 GN=RFS PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000061 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004109_00816.