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CAZyme Information: MGYG000004109_00925

You are here: Home > Sequence: MGYG000004109_00925

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; ; ; ;
CAZyme ID MGYG000004109_00925
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
654 MGYG000004109_21|CGC1 70888.11 4.9067
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004109 2073923 MAG United Kingdom Europe
Gene Location Start: 27154;  End: 29118  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004109_00925.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 177 459 2.8e-31 0.7476923076923077
CBM66 496 631 2.2e-20 0.8838709677419355

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 2.29e-07 147 442 117 452
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02218 PLN02218 0.002 229 456 197 410
polygalacturonase ADPG

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SBN61977.1 8.86e-107 24 477 47 480
QKS86335.1 2.03e-99 20 477 36 475
QGY47513.1 2.26e-87 39 476 60 471
QIH36099.1 1.01e-42 40 476 57 471
QQR16514.1 1.64e-42 46 476 31 464

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 2.26e-07 152 470 67 421
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000451 0.998028 0.000889 0.000226 0.000204 0.000181

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004109_00925.