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CAZyme Information: MGYG000004116_01574

You are here: Home > Sequence: MGYG000004116_01574

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; UMGS1591;
CAZyme ID MGYG000004116_01574
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1010 MGYG000004116_8|CGC1 108365.12 4.6161
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004116 3787047 MAG United Kingdom Europe
Gene Location Start: 15242;  End: 18274  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004116_01574.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 709 1000 1.1e-34 0.7907692307692308

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 3.54e-12 639 872 133 366
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 1.59e-06 731 1005 93 320
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02793 PLN02793 0.001 716 821 141 256
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCI63342.1 1.61e-124 530 999 34 516
BCI63341.1 1.43e-111 527 1007 257 748
QNK57052.1 6.33e-104 505 1002 4 482
QNK57056.1 5.63e-97 552 1003 47 489
AZS17008.1 1.74e-96 552 1001 65 503

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.207648 0.791054 0.000276 0.000502 0.000270 0.000250

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004116_01574.