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CAZyme Information: MGYG000004116_01589

You are here: Home > Sequence: MGYG000004116_01589

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; UMGS1591;
CAZyme ID MGYG000004116_01589
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
575 MGYG000004116_8|CGC1 63139.63 5.868
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004116 3787047 MAG United Kingdom Europe
Gene Location Start: 38197;  End: 39924  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004116_01589.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 259 557 1.7e-27 0.7661538461538462

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 3.69e-10 296 473 241 397
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02793 PLN02793 5.81e-04 333 380 208 256
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNK57052.1 2.83e-107 104 574 38 487
BCI63342.1 1.43e-99 87 553 30 503
QNK57056.1 6.32e-95 95 559 31 477
BCI63341.1 1.36e-91 98 558 273 732
QTH41143.1 1.50e-91 88 575 23 491

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000000 1.000041 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004116_01589.