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CAZyme Information: MGYG000004132_01753

You are here: Home > Sequence: MGYG000004132_01753

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species V9D3004 sp900760345
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; V9D3004; V9D3004 sp900760345
CAZyme ID MGYG000004132_01753
CAZy Family GH0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
410 MGYG000004132_27|CGC1 45587.14 4.2116
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004132 2510246 MAG United Kingdom Europe
Gene Location Start: 39503;  End: 40735  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004132_01753.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01471 PG_binding_1 1.35e-13 335 396 1 57
Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409 PGRP 6.11e-08 326 396 117 183
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409 PGRP 6.59e-08 283 396 1 102
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
pfam13620 CarboxypepD_reg 6.27e-06 6 100 2 78
Carboxypeptidase regulatory-like domain.
COG2385 SpoIID 0.006 283 310 362 389
Peptidoglycan hydrolase (amidase) enhancer domain [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRT50293.1 1.53e-194 4 408 13 417
QEI32542.1 1.23e-191 1 408 21 428
QHB25032.1 1.23e-191 1 408 21 428
AWY98201.1 1.80e-191 4 410 17 421
QRT31086.1 1.88e-191 1 408 23 430

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000036 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004132_01753.