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CAZyme Information: MGYG000004140_00196

You are here: Home > Sequence: MGYG000004140_00196

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1375 sp900551235
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; UMGS1375; UMGS1375 sp900551235
CAZyme ID MGYG000004140_00196
CAZy Family CBM32
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1963 MGYG000004140_1|CGC3 212465.07 6.305
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004140 2714632 MAG United Kingdom Europe
Gene Location Start: 223001;  End: 228892  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004140_00196.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM32 124 248 4.9e-19 0.8629032258064516

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5492 YjdB 7.95e-25 1466 1715 99 327
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
COG5492 YjdB 2.43e-24 1385 1624 109 327
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam00754 F5_F8_type_C 2.77e-21 110 248 1 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
COG5492 YjdB 7.54e-18 1599 1720 140 261
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam02368 Big_2 1.29e-15 1550 1627 1 77
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDO70357.1 3.58e-238 264 1140 94 917
ALG48827.1 5.77e-238 4 1150 8 1182
ABG83191.1 1.18e-235 4 1150 8 1182
AXH52486.1 4.46e-235 4 1150 8 1182
QUT26415.1 7.13e-235 264 1136 94 913

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1GOF_A 1.32e-12 104 258 9 153
NOVELTHIOETHER BOND REVEALED BY A 1.7 ANGSTROMS CRYSTAL STRUCTURE OF GALACTOSE OXIDASE [Hypomyces rosellus],1GOG_A NOVEL THIOETHER BOND REVEALED BY A 1.7 ANGSTROMS CRYSTAL STRUCTURE OF GALACTOSE OXIDASE [Hypomyces rosellus],1GOH_A NOVEL THIOETHER BOND REVEALED BY A 1.7 ANGSTROMS CRYSTAL STRUCTURE OF GALACTOSE OXIDASE [Hypomyces rosellus],2EIE_A Chain A, Galactose oxidase [Fusarium graminearum],2JKX_A Chain A, GALACTOSE OXIDASE [Fusarium graminearum],2VZ1_A Chain A, GALACTOSE OXIDASE [Fusarium graminearum],2VZ3_A Chain A, Galactose Oxidase [Fusarium graminearum]
2EID_A 1.32e-12 104 258 9 153
ChainA, Galactose oxidase [Fusarium graminearum]
2EIC_A 1.32e-12 104 258 9 153
ChainA, Galactose oxidase [Fusarium graminearum]
2EIB_A 1.32e-12 104 258 9 153
ChainA, Galactose oxidase [Fusarium graminearum]
1T2X_A 1.32e-12 104 258 9 153
Glactoseoxidase C383S mutant identified by directed evolution [Fusarium sp.]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P85991 2.18e-18 1523 1721 65 258
Ig-like virion protein OS=Serratia phage KSP90 OX=552528 PE=1 SV=2
P33747 1.44e-12 1541 1721 29 202
Uncharacterized protein CA_P0160 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_P0160 PE=3 SV=2
I1S2N3 5.83e-12 104 258 50 194
Galactose oxidase OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=GAOA PE=3 SV=1
P0CS93 7.67e-12 104 258 50 194
Galactose oxidase OS=Gibberella zeae OX=5518 GN=GAOA PE=1 SV=1
Q02834 1.18e-08 102 250 502 643
Sialidase OS=Micromonospora viridifaciens OX=1881 GN=nedA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000405 0.998667 0.000210 0.000267 0.000229 0.000189

TMHMM  Annotations      download full data without filtering help

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