logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004145_00004

You are here: Home > Sequence: MGYG000004145_00004

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA644 sp900547165
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; UBA644; UBA644; UBA644 sp900547165
CAZyme ID MGYG000004145_00004
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1682 183595.4 4.2929
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004145 2012648 MAG United Kingdom Europe
Gene Location Start: 2633;  End: 7681  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004145_00004.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 50 801 2.5e-123 0.8164893617021277

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10340 ebgA 6.04e-111 40 816 6 728
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 7.16e-91 37 780 17 716
beta-galactosidase.
COG3250 LacZ 2.41e-78 72 621 9 504
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02836 Glyco_hydro_2_C 8.65e-45 384 697 5 302
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
pfam02837 Glyco_hydro_2_N 7.28e-35 77 245 3 167
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
APC49533.1 7.63e-127 28 792 27 748
QKY70370.1 6.49e-124 28 792 29 750
AXH53078.1 1.32e-118 36 1237 53 1248
ALS26503.1 4.52e-118 36 781 16 725
QJD82233.1 1.93e-116 36 782 17 731

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6S6Z_A 3.02e-78 36 717 3 616
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 3.05e-78 36 717 4 617
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3DEC_A 4.62e-78 33 717 3 638
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3DYM_A 5.24e-73 33 781 12 713
ChainA, Beta-galactosidase [Escherichia coli K-12],3DYM_B Chain B, Beta-galactosidase [Escherichia coli K-12],3DYM_C Chain C, Beta-galactosidase [Escherichia coli K-12],3DYM_D Chain D, Beta-galactosidase [Escherichia coli K-12],3E1F_1 Chain 1, Beta-galactosidase [Escherichia coli K-12],3E1F_2 Chain 2, Beta-galactosidase [Escherichia coli K-12],3E1F_3 Chain 3, Beta-galactosidase [Escherichia coli K-12],3E1F_4 Chain 4, Beta-galactosidase [Escherichia coli K-12]
3MUY_1 1.25e-72 33 781 12 713
Chain1, Beta-D-galactosidase [Escherichia coli K-12],3MUY_2 Chain 2, Beta-D-galactosidase [Escherichia coli K-12],3MUY_3 Chain 3, Beta-D-galactosidase [Escherichia coli K-12],3MUY_4 Chain 4, Beta-D-galactosidase [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O52847 7.91e-114 36 782 19 729
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
Q9K9C6 4.34e-91 34 621 6 565
Beta-galactosidase OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=lacZ PE=3 SV=1
P24131 7.90e-85 36 782 9 701
Beta-galactosidase OS=Clostridium acetobutylicum OX=1488 GN=cbgA PE=2 SV=2
P23989 1.15e-83 39 800 12 739
Beta-galactosidase OS=Streptococcus thermophilus OX=1308 GN=lacZ PE=3 SV=1
Q56307 1.67e-77 36 717 4 617
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000005 0.001200 0.998797 0.000001 0.000001 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004145_00004.