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CAZyme Information: MGYG000004150_00300
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Comamonas kerstersii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Burkholderiaceae; Comamonas; Comamonas kerstersii | |||||||||||
| CAZyme ID | MGYG000004150_00300 | |||||||||||
| CAZy Family | GT19 | |||||||||||
| CAZyme Description | Lipid-A-disaccharide synthase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 302796; End: 303929 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT19 | 1 | 356 | 8.9e-127 | 0.9774011299435028 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK00025 | lpxB | 2.42e-154 | 1 | 375 | 6 | 375 | lipid-A-disaccharide synthase; Reviewed |
| COG0763 | LpxB | 5.61e-130 | 1 | 364 | 6 | 367 | Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis]. |
| pfam02684 | LpxB | 1.43e-98 | 1 | 356 | 3 | 359 | Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. |
| TIGR00215 | lpxB | 6.27e-90 | 1 | 375 | 10 | 383 | lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
| PRK01021 | lpxB | 3.56e-43 | 3 | 331 | 233 | 566 | lipid-A-disaccharide synthase; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AQZ98747.1 | 4.00e-282 | 1 | 377 | 1 | 377 |
| QTW20574.1 | 1.10e-279 | 1 | 377 | 1 | 377 |
| ANY62025.1 | 2.48e-247 | 1 | 376 | 13 | 388 |
| QTX21660.1 | 6.79e-245 | 1 | 376 | 13 | 388 |
| QXW17324.1 | 9.65e-245 | 1 | 376 | 13 | 388 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5W8N_A | 4.04e-87 | 1 | 374 | 11 | 380 | LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)] |
| 5W8S_A | 5.71e-87 | 1 | 374 | 11 | 380 | LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A1WHV5 | 2.56e-178 | 1 | 376 | 13 | 388 | Lipid-A-disaccharide synthase OS=Verminephrobacter eiseniae (strain EF01-2) OX=391735 GN=lpxB PE=3 SV=1 |
| Q21WX7 | 9.30e-174 | 1 | 375 | 13 | 387 | Lipid-A-disaccharide synthase OS=Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) OX=338969 GN=lpxB PE=3 SV=1 |
| Q5NZG2 | 1.15e-123 | 1 | 376 | 7 | 379 | Lipid-A-disaccharide synthase OS=Aromatoleum aromaticum (strain EbN1) OX=76114 GN=lpxB PE=3 SV=1 |
| Q7VYB7 | 3.49e-123 | 1 | 374 | 7 | 388 | Lipid-A-disaccharide synthase OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) OX=257313 GN=lpxB PE=3 SV=1 |
| Q7WJ81 | 3.49e-123 | 1 | 374 | 7 | 388 | Lipid-A-disaccharide synthase OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) OX=257310 GN=lpxB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000002 | 0.000031 | 0.000002 | 0.000000 | 0.000000 | 0.000000 |