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CAZyme Information: MGYG000004151_03727
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pseudomonas citronellolis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas citronellolis | |||||||||||
| CAZyme ID | MGYG000004151_03727 | |||||||||||
| CAZy Family | PL7 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 4313; End: 4984 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL7 | 3 | 222 | 2.3e-89 | 0.9908675799086758 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam08787 | Alginate_lyase2 | 3.78e-73 | 2 | 222 | 1 | 222 | Alginate lyase. Alginate lyases are enzymes that degrade the linear polysaccharide alignate. They cleave the glycosidic linkage of alignate through a beta-elimination reaction. This family forms an all beta fold and is different to all alpha fold of pfam05426. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AMO77587.1 | 5.49e-164 | 1 | 223 | 1 | 223 |
| ANI16345.1 | 2.24e-163 | 1 | 223 | 1 | 223 |
| QKR51509.1 | 7.10e-119 | 1 | 223 | 1 | 223 |
| AUA71906.1 | 7.10e-119 | 1 | 223 | 1 | 223 |
| BAP20548.1 | 7.10e-119 | 1 | 223 | 1 | 223 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1VAV_A | 2.05e-119 | 3 | 223 | 2 | 222 | Crystalstructure of alginate lyase PA1167 from Pseudomonas aeruginosa at 2.0 A resolution [Pseudomonas aeruginosa PAO1],1VAV_B Crystal structure of alginate lyase PA1167 from Pseudomonas aeruginosa at 2.0 A resolution [Pseudomonas aeruginosa PAO1] |
| 2CWS_A | 6.83e-26 | 2 | 222 | 10 | 227 | Crystalstructure at 1.0 A of alginate lyase A1-II', a member of polysaccharide lyase family-7 [Sphingomonas sp. A1],2Z42_A Crystal Structure of Family 7 Alginate Lyase A1-II' from Sphingomonas sp. A1 [Sphingomonas sp.] |
| 2ZAB_A | 2.58e-25 | 2 | 222 | 9 | 226 | ChainA, Alginate lyase [Sphingomonas sp. A1],2ZAC_A Chain A, Alginate lyase [Sphingomonas sp. A1] |
| 2ZAA_A | 2.73e-24 | 2 | 222 | 9 | 226 | ChainA, Alginate lyase [Sphingomonas sp. A1] |
| 2ZA9_A | 5.34e-24 | 2 | 222 | 9 | 226 | ChainA, Alginate lyase [unidentified] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q59478 | 1.53e-11 | 2 | 222 | 29 | 303 | Alginate lyase OS=Klebsiella pneumoniae OX=573 GN=alyA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000057 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |