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CAZyme Information: MGYG000004170_01105

You are here: Home > Sequence: MGYG000004170_01105

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes; Bacilli; RF39; UBA660; CAG-710;
CAZyme ID MGYG000004170_01105
CAZy Family CBM51
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1079 121816.17 5.2582
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004170 1128310 MAG United Kingdom Europe
Gene Location Start: 8183;  End: 11422  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004170_01105.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM51 46 191 2.6e-23 0.9925373134328358
CBM32 855 966 6.2e-18 0.8629032258064516

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08305 NPCBM 9.99e-25 46 191 3 135
NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
pfam00754 F5_F8_type_C 1.84e-15 855 963 5 114
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
smart00776 NPCBM 6.63e-15 46 191 5 144
This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.
cd00057 FA58C 4.35e-10 854 965 15 131
Substituted updates: Jan 31, 2002
pfam13285 DUF4073 1.56e-05 743 817 61 141
Domain of unknown function (DUF4073). This family is frequently found at the C-terminus of bacterial proteins carrying the family, Metallophos pfam00149.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AQW23377.1 1.57e-206 1 986 1 988
ATD49073.1 1.82e-206 35 986 41 993
AMN35280.1 6.81e-205 38 986 41 988
BCL58565.1 3.86e-156 44 988 79 1051
VTP91146.1 1.13e-138 36 989 133 1102

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JS4_A 7.40e-10 32 217 598 782
ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
2J7M_A 7.06e-07 849 975 11 139
Characterizationof a Family 32 CBM [Clostridium perfringens]
2J1A_A 7.20e-07 849 975 12 140
Structureof CBM32 from Clostridium perfringens beta-N- acetylhexosaminidase GH84C in complex with galactose [Clostridium perfringens ATCC 13124],2J1E_A High Resolution Crystal Structure of CBM32 from a N-acetyl-beta- hexosaminidase in complex with lacNAc [Clostridium perfringens ATCC 13124]
2V5D_A 9.15e-06 849 975 599 727
Structureof a Family 84 Glycoside Hydrolase and a Family 32 Carbohydrate-Binding Module in Tandem from Clostridium perfringens. [Clostridium perfringens]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000531 0.493014 0.505879 0.000224 0.000195 0.000146

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004170_01105.