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CAZyme Information: MGYG000004172_01063

You are here: Home > Sequence: MGYG000004172_01063

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; ;
CAZyme ID MGYG000004172_01063
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
647 71781.28 9.4678
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004172 3050906 MAG United Kingdom Europe
Gene Location Start: 83683;  End: 85626  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004172_01063.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 128 491 3.2e-60 0.42154255319148937

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10340 ebgA 6.95e-53 131 603 117 685
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250 LacZ 3.17e-41 137 483 96 433
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK09525 lacZ 5.47e-39 130 485 127 491
beta-galactosidase.
pfam02836 Glyco_hydro_2_C 4.21e-23 333 497 1 176
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
PRK10150 PRK10150 2.19e-19 131 479 73 445
beta-D-glucuronidase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCG54468.1 9.07e-142 58 586 22 591
QGA23685.1 4.82e-135 71 579 28 575
BBL04653.1 1.87e-124 72 493 24 437
BBL14184.1 2.65e-124 72 493 24 437
BBL07296.1 1.26e-113 78 493 26 429

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3DEC_A 1.31e-41 117 491 118 495
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
6S6Z_A 6.35e-39 132 483 118 467
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 6.36e-39 132 483 119 468
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3VD3_A 4.71e-37 127 496 152 530
E.coli (lacZ) beta-galactosidase (N460D) [Escherichia coli],3VD3_B E. coli (lacZ) beta-galactosidase (N460D) [Escherichia coli],3VD3_C E. coli (lacZ) beta-galactosidase (N460D) [Escherichia coli],3VD3_D E. coli (lacZ) beta-galactosidase (N460D) [Escherichia coli],3VD4_A E. coli (lacZ) beta-galactosidase (N460D) in complex with IPTG [Escherichia coli],3VD4_B E. coli (lacZ) beta-galactosidase (N460D) in complex with IPTG [Escherichia coli],3VD4_C E. coli (lacZ) beta-galactosidase (N460D) in complex with IPTG [Escherichia coli],3VD4_D E. coli (lacZ) beta-galactosidase (N460D) in complex with IPTG [Escherichia coli]
3BGA_A 6.03e-37 117 491 122 499
Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O52847 9.71e-42 126 492 136 517
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
A1SWB8 5.85e-39 127 496 122 500
Beta-galactosidase OS=Psychromonas ingrahamii (strain 37) OX=357804 GN=lacZ PE=3 SV=1
Q56307 3.48e-38 132 483 119 468
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
Q6D736 2.53e-37 127 485 132 501
Beta-galactosidase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=lacZ PE=3 SV=1
Q8D4H3 7.98e-37 148 496 142 498
Beta-galactosidase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=lacZ PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.401551 0.592502 0.004322 0.000807 0.000423 0.000385

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004172_01063.