CAZyme Information: MGYG000004172_01410

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae
• CAZyme ID: MGYG000004172_01410
• CAZy Family: PL35
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
609		68301.38	9.0074

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004172	3050906	MAG	United Kingdom	Europe

• Gene Location: Start: 127197; End: 129026 Strand: -

Full Sequence      

MKILRPILCLFSVFLFCLPVRLPAADPGFDYDRTGAHPRILLGKKEMRQLRKTVKENPPL
GAVHARILELCDGFLEKPVLERKMLGRRMLSVSRNALQRIFYLSYAYRMTGRTEYLERAA
KELDAVSAFSDWNPSHFLDCAEMTMAVAIGYDWLYGDLSSRTKENVRRAIVEKGLGASLV
PRYEQMFTTRKNNWNQVCHAGMVYGALAVLDTDRALAERVIVRAVENNPGVMEMYAPDGV
YPEGYSYWGYGTSFEVMMLAALEHAFGSDAGLSRFAGFDRTAGYMLYMTGPSGLAFNYSD
SGPGVNVHPAMFWFAQRYGNPSWVWTESRLIGSDPGRDRLLPALVVFARGLDFDRVAPPA
EKVWAGGGPNPVVLVRTGWKDDLQDKYLAMKGGSAQLSHTHLDMGSFVYDAGGLRWAMDL
GMVDYNSLESRGVKLWGRKQNSERWTIFRYNNYAHNTLTVNGRLHDVHGFVPVTRVYREG
RELGGRMDLSALFPDLKSAVRKAVIVDEKRLVVEDRVVGGERPAVLRFSMVTPAQAEIVD
AETIRLTQRGQTMTMRFKGTRSLAVRTWPTKPARPYEPSNEGTVIVGFEAEIPAGAAETF
EMTLEEAGK

Enzyme Prediction     

No EC number prediction in MGYG000004172_01410.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL35	385	558	6.4e-59	0.9608938547486033

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07940	Hepar_II_III	1.32e-08	387	557	23	190	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
pfam16332	DUF4962	1.02e-04	35	174	135	290	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AYB29714.1	1.30e-188	28	604	20	598
AUD03829.1	4.84e-188	37	604	37	607
QUT49750.1	1.97e-184	10	604	8	604
QJW90915.1	2.72e-181	36	594	36	597
QEC57955.1	5.52e-181	15	604	14	606

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3A0O_A	1.98e-12	36	427	138	560	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	3.14e-11	36	427	138	560	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000205	0.999198	0.000169	0.000141	0.000131	0.000126

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004172_01410.