CAZyme Information: MGYG000004172_02297

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae
• CAZyme ID: MGYG000004172_02297
• CAZy Family: GH50
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
502	MGYG000004172_13|CGC1	57203.29	4.9597

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004172	3050906	MAG	United Kingdom	Europe

• Gene Location: Start: 47611; End: 49119 Strand: +

Full Sequence      

MKTNILFGAAALLFALSACGDDPKGGEEPGPQPPAGNTEDRYESVSYKKLPTDATWLEGE
TLIVDNVGNYTPVARRSQTEWGGRPGSYTFTQVTGTEGFFRVGKIGQRWYLIAPDNSPVI
LRGTQDVRPGTTDAYKARFATDVAWAAEAGQFLVDNNLNATLQGGLRPAVMPAEYKDLIL
NPVEGRKIAYAEIVYMLRSYLWDYNYSKNFSFKFDDAVHNRLYVMFEETYLDYLDQWAAQ
VCAMYKDDVHFIGYMLDNELNYKKMMSNTNGSQGLDIRMALDMPEGSGIRKFAEKFVADR
GYTPQDVITQAVYDEFREVMADYYFKTTTEAIRRHDPNHLILGNRIYVSNMYDERVMKAC
AKYCDVVSINYYNAWSVDPAYIANLKSWFDKPFIVTEFYTKGADANVDGEPYSNRPGGGW
IVKTQKDRGKFHQNIGIGLIAAQNCVGWYHFNYVDTYEDAKYQGYTNKGMLALNYYPYVD
FMEYVKQLNDNVYGLADHYDAK

Enzyme Prediction     

No EC number prediction in MGYG000004172_02297.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH50	216	493	8.4e-47	0.45788667687595713

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK10150	PRK10150	4.16e-04	317	413	421	526	beta-D-glucuronidase; Provisional

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT32554.1	4.27e-130	42	502	47	511
QUT78441.1	2.06e-129	6	502	15	515
QDM11346.1	2.06e-129	6	502	15	515
QGT73212.1	4.12e-129	6	502	15	515
QNL40758.1	1.28e-127	5	502	10	514

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5T3B_A	1.24e-48	29	500	27	480	ChainA, Glycoside Hydrolase [Phocaeicola plebeius],5T3B_B Chain B, Glycoside Hydrolase [Phocaeicola plebeius]
6XJ9_A	9.23e-12	321	493	595	759	Structureof PfGH50B [Pseudoalteromonas fuliginea],6XJ9_B Structure of PfGH50B [Pseudoalteromonas fuliginea]
4BQ2_A	3.68e-11	310	493	568	743	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
4BQ4_A	3.68e-11	310	493	568	743	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ4_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
5Z6P_A	3.17e-09	238	493	488	759	Thecrystal structure of an agarase, AgWH50C [Agarivorans gilvus],5Z6P_B The crystal structure of an agarase, AgWH50C [Agarivorans gilvus]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000000	0.000000	1.000069	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004172_02297.