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CAZyme Information: MGYG000004180_00425
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; | |||||||||||
| CAZyme ID | MGYG000004180_00425 | |||||||||||
| CAZy Family | GH2 | |||||||||||
| CAZyme Description | Beta-galactosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 59751; End: 62477 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH2 | 24 | 464 | 2.9e-67 | 0.4920212765957447 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3250 | LacZ | 5.06e-21 | 27 | 431 | 10 | 407 | Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]. |
| PRK10150 | PRK10150 | 1.25e-19 | 16 | 449 | 1 | 440 | beta-D-glucuronidase; Provisional |
| pfam00703 | Glyco_hydro_2 | 8.32e-10 | 200 | 307 | 1 | 106 | Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. |
| pfam02837 | Glyco_hydro_2_N | 1.52e-07 | 32 | 164 | 4 | 135 | Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction. |
| PRK09525 | lacZ | 0.001 | 272 | 363 | 301 | 389 | beta-galactosidase. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUU06734.1 | 0.0 | 14 | 908 | 9 | 907 |
| QQT78472.1 | 0.0 | 14 | 908 | 9 | 907 |
| ASM65010.1 | 0.0 | 14 | 908 | 9 | 907 |
| QRP59643.1 | 0.0 | 14 | 908 | 9 | 907 |
| QUT64934.1 | 0.0 | 16 | 908 | 12 | 906 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6U7J_A | 1.24e-22 | 16 | 457 | 10 | 448 | UnculturedClostridium sp. Beta-glucuronidase [uncultured Clostridium sp.],6U7J_B Uncultured Clostridium sp. Beta-glucuronidase [uncultured Clostridium sp.],6U7J_C Uncultured Clostridium sp. Beta-glucuronidase [uncultured Clostridium sp.],6U7J_D Uncultured Clostridium sp. Beta-glucuronidase [uncultured Clostridium sp.] |
| 6HPD_A | 1.16e-17 | 51 | 555 | 56 | 560 | Thestructure of a beta-glucuronidase from glycoside hydrolase family 2 [Formosa agariphila KMM 3901] |
| 3GM8_A | 1.30e-17 | 93 | 433 | 66 | 399 | ChainA, Glycoside hydrolase family 2, candidate beta-glycosidase [Phocaeicola vulgatus ATCC 8482] |
| 6LEM_B | 1.81e-15 | 27 | 449 | 7 | 434 | ChainB, Beta-D-glucuronidase [Escherichia coli] |
| 6LEG_A | 1.82e-15 | 27 | 449 | 10 | 437 | ChainA, Beta-D-glucuronidase [Escherichia coli],6LEG_B Chain B, Beta-D-glucuronidase [Escherichia coli],6LEG_C Chain C, Beta-D-glucuronidase [Escherichia coli],6LEG_D Chain D, Beta-D-glucuronidase [Escherichia coli],6LEL_A Chain A, Beta-D-glucuronidase [Escherichia coli],6LEL_B Chain B, Beta-D-glucuronidase [Escherichia coli] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| T2KN75 | 6.30e-17 | 51 | 555 | 47 | 551 | Beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22060 PE=1 SV=1 |
| P05804 | 9.94e-15 | 27 | 449 | 9 | 436 | Beta-glucuronidase OS=Escherichia coli (strain K12) OX=83333 GN=uidA PE=1 SV=2 |
| Q5R5N6 | 1.09e-14 | 16 | 430 | 27 | 451 | Beta-glucuronidase OS=Pongo abelii OX=9601 GN=GUSB PE=2 SV=2 |
| P08236 | 1.44e-14 | 16 | 430 | 27 | 451 | Beta-glucuronidase OS=Homo sapiens OX=9606 GN=GUSB PE=1 SV=2 |
| O77695 | 3.92e-13 | 16 | 546 | 24 | 572 | Beta-glucuronidase (Fragment) OS=Chlorocebus aethiops OX=9534 GN=GUSB PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.001100 | 0.607076 | 0.390961 | 0.000331 | 0.000269 | 0.000245 |