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CAZyme Information: MGYG000004221_01279

You are here: Home > Sequence: MGYG000004221_01279

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS621 sp900543915
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Borkfalkiaceae; UMGS621; UMGS621 sp900543915
CAZyme ID MGYG000004221_01279
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
663 MGYG000004221_13|CGC1 72153.92 4.355
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004221 1971557 MAG United Kingdom Europe
Gene Location Start: 26713;  End: 28704  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004221_01279.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 371 642 3.2e-40 0.796923076923077

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 5.43e-16 417 580 237 402
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03003 PLN03003 2.14e-04 417 566 137 291
Probable polygalacturonase At3g15720
pfam00295 Glyco_hydro_28 3.80e-04 420 648 87 315
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02155 PLN02155 0.007 420 489 147 218
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNK57811.1 1.34e-118 1 651 1 640
BBH22092.1 2.50e-117 1 651 4 647
QTH44486.1 9.32e-110 1 649 1 645
QJD87459.1 2.46e-108 14 649 22 643
AMB60207.1 3.09e-97 100 651 1 556

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 2.30e-07 417 534 189 316
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000010 1.000045 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

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