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CAZyme Information: MGYG000004223_00643
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UMGS1883 sp900763305 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; UMGS1883; UMGS1883; UMGS1883; UMGS1883 sp900763305 | |||||||||||
| CAZyme ID | MGYG000004223_00643 | |||||||||||
| CAZy Family | PL21 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 2306; End: 5518 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM32 | 949 | 1065 | 1.2e-20 | 0.8870967741935484 |
| PL21 | 412 | 476 | 7.6e-18 | 0.9166666666666666 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00754 | F5_F8_type_C | 1.08e-15 | 948 | 1047 | 4 | 109 | F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. |
| pfam18675 | HepII_C | 5.87e-12 | 700 | 783 | 3 | 87 | Heparinase II C-terminal domain. Heparinase II (HepII) is an 85-kDa dimeric enzyme that depolymerizes both heparin and heparan sulfate glycosaminoglycans. The protein is composed of three domains: an N-terminal alpha-helical domain, a central two-layered beta-sheet domain, and a C-terminal domain forming a two-layered beta-sheet. The C-terminal domain contains nine beta-strands packed together in a manner resembling a beta-barrel. |
| pfam16332 | DUF4962 | 3.03e-06 | 54 | 235 | 130 | 331 | Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown. |
| cd00057 | FA58C | 2.05e-05 | 945 | 1047 | 13 | 125 | Substituted updates: Jan 31, 2002 |
| smart00231 | FA58C | 2.79e-04 | 948 | 1052 | 16 | 125 | Coagulation factor 5/8 C-terminal domain, discoidin domain. Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BBH20141.1 | 5.96e-118 | 58 | 1052 | 236 | 1207 |
| QHW00380.1 | 1.71e-100 | 58 | 783 | 68 | 799 |
| ACN29695.1 | 5.18e-92 | 46 | 782 | 30 | 771 |
| ACU04612.1 | 6.44e-90 | 58 | 782 | 45 | 770 |
| ABJ17170.1 | 1.69e-89 | 58 | 782 | 45 | 770 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2FUQ_A | 1.36e-91 | 58 | 782 | 20 | 745 | ChainA, heparinase II protein [Pedobacter heparinus],2FUQ_B Chain B, heparinase II protein [Pedobacter heparinus] |
| 3E80_A | 1.42e-91 | 58 | 782 | 22 | 747 | Structureof Heparinase II complexed with heparan sulfate degradation disaccharide product [Pedobacter heparinus],3E80_B Structure of Heparinase II complexed with heparan sulfate degradation disaccharide product [Pedobacter heparinus],3E80_C Structure of Heparinase II complexed with heparan sulfate degradation disaccharide product [Pedobacter heparinus] |
| 3E7J_A | 1.96e-91 | 58 | 782 | 22 | 747 | ChainA, Heparinase II protein [Pedobacter heparinus],3E7J_B Chain B, Heparinase II protein [Pedobacter heparinus] |
| 2FUT_A | 2.18e-87 | 58 | 782 | 21 | 746 | ChainA, heparinase II protein [Pedobacter heparinus],2FUT_B Chain B, heparinase II protein [Pedobacter heparinus] |
| 5ZU6_A | 9.47e-29 | 926 | 1064 | 25 | 152 | ACBM32 derived from alginate lyase B (AlyB-OU02) [Vibrio] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| C6XZB6 | 1.29e-90 | 58 | 782 | 45 | 770 | Heparin and heparin-sulfate lyase OS=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3) OX=485917 GN=hepB PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000309 | 0.998954 | 0.000188 | 0.000175 | 0.000169 | 0.000159 |
