CAZyme Information: MGYG000004230_00647

Basic Information

• Species: Clostridium sp900759995
• Lineage: Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sp900759995
• CAZyme ID: MGYG000004230_00647
• CAZy Family: CBM50
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
527		59717.14	4.5244

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004230	3516057	MAG	United Kingdom	Europe

• Gene Location: Start: 39911; End: 41494 Strand: -

Full Sequence      

MSQVDVIRESIRYEQLLREGSANQSIKGEYLLRDSQYPDMKEVLGVDVKATITNKEVLGE
KVIVEGSLDYIVFYLSKDESSLDSPANKIHAVVFNDKFSNYLDLNNDEHNIVCNVECDIE
HIEANWMNERKVGINGLIILKWKIYKIGEFEYVKDIEGKDDIQIKKEEEVLNGVKGDKDI
DFMGKSMIKVNMDKPEIDEILKCSMNLHKKEVKVVDGKAYIGCYCKISILYKGRDNKELE
SLEDDVYLSREEELAGINGDMISVLELMVADEQHAINLDDVGENRIVNVEFLVKGNVKVY
SNEKVEILKDAYSPTMNIELENANKEFTLIHSIANSEVMAKETFEIEDKEERVGEVIAVT
GHPIIKDKIVEDERVKVEGLVKTNIIYRLAGEDLNYGILSGSIPFNTSIDIRGLRKDMSV
IINPYLENIDTNIEGNAVSVRATVGLNIKAYYKINKNYIKDVNEGVGEVKEKKASVTIYV
VGEGETLWDLAKKYNTTVSELEKLNDLNEEENIKPGCKLIIPGRAIF

Enzyme Prediction     

No EC number prediction in MGYG000004230_00647.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd00118	LysM	5.02e-11	477	521	1	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
pfam12673	DUF3794	1.11e-09	353	433	2	79	Domain of unknown function (DUF3794). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, and is approximately 90 amino acids in length. The family is found in association with pfam01476.
pfam01476	LysM	1.73e-09	479	522	1	43	LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.
smart00257	LysM	1.26e-08	478	521	1	44	Lysin motif.
pfam12673	DUF3794	2.77e-08	39	125	1	78	Domain of unknown function (DUF3794). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, and is approximately 90 amino acids in length. The family is found in association with pfam01476.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ASW44085.1	4.04e-237	1	527	1	527
ATD56377.1	2.24e-236	1	527	1	526
ATD55952.1	2.24e-236	1	527	1	526
QBJ76253.1	2.24e-236	1	527	1	526
SLK22265.1	2.24e-236	1	527	1	526

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000043	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004230_00647.