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CAZyme Information: MGYG000004230_01211
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Clostridium sp900759995 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sp900759995 | |||||||||||
| CAZyme ID | MGYG000004230_01211 | |||||||||||
| CAZy Family | GH73 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 38948; End: 42223 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5492 | YjdB | 5.17e-24 | 683 | 1013 | 24 | 323 | Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only]. |
| COG5492 | YjdB | 2.74e-19 | 958 | 1090 | 25 | 159 | Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only]. |
| COG5492 | YjdB | 2.73e-18 | 731 | 1060 | 26 | 324 | Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only]. |
| COG4193 | LytD | 5.13e-17 | 408 | 563 | 59 | 223 | Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]. |
| pfam07538 | ChW | 1.36e-16 | 1010 | 1044 | 1 | 35 | Clostridial hydrophobic W. A novel extracellular macromolecular system has been proposed based on the proteins containing ChW repeats. ChW stands for Clostridial hydrophobic with conserved W (tryptophan). This repeat was originally described in Clostridium acetobutylicum but is also found in other Gram-positive bacteria including Enterococcus faecalis, Streptococcus agalactiae and Streptomyces coelicolor. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QQA11780.1 | 2.59e-162 | 139 | 678 | 40 | 578 |
| AXH51676.1 | 1.99e-161 | 139 | 678 | 40 | 578 |
| AWS25220.1 | 3.93e-161 | 139 | 678 | 40 | 578 |
| ASY50729.1 | 3.93e-161 | 139 | 678 | 40 | 578 |
| ALG48000.1 | 4.57e-161 | 139 | 678 | 40 | 578 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4Q2W_A | 7.14e-24 | 266 | 563 | 20 | 277 | CrystalStructure of pneumococcal peptidoglycan hydrolase LytB [Streptococcus pneumoniae TIGR4] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P59205 | 1.67e-22 | 266 | 563 | 388 | 645 | Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=lytB PE=1 SV=1 |
| P59206 | 1.91e-22 | 266 | 563 | 432 | 689 | Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=lytB PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000276 | 0.999087 | 0.000161 | 0.000160 | 0.000144 | 0.000139 |