CAZyme Information: MGYG000004230_01242

Basic Information

• Species: Clostridium sp900759995
• Lineage: Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sp900759995
• CAZyme ID: MGYG000004230_01242
• CAZy Family: CBM32
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1656		186173.57	4.2812

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004230	3516057	MAG	United Kingdom	Europe

• Gene Location: Start: 27350; End: 32320 Strand: -

Full Sequence      

MGFKSLSKISLCIILSFSMVLTNMPFAVKAEVDNNNNVETTLDNEKIVIANDYIKREFSI
NNGKVLTTLIENNRAKTQIVPKEGSEDFIINTIKTESSDSESTQPIVPKNVIERTNWKAA
LSVSTGTKYSDVDVLKLFDGNKDTYINNYQISGYPISLTIDLGEKKSISSFSYLKRPGYS
DSAYGINGTMGKYKLYVSEDGLTWKEAGSGEFTRANYNLHQEGNLFNVGDVVYGNFDKTY
ETRYVKIDQLSDALGSTQEYTASEINLFSDMYQSSKESNTDTRIKSSNLIIDSETTRIDD
IENGKKLTISYKPYVLNNIEYDIDMITVLEKDDHYMRSFIEVKTNNTAARIDYIDIDHFI
LSEDIMSTVWSHPDLKDVSSMWIGKNELMLGQPIYVNGMFFGSEFPATDTDIVNGEMQIR
YYSGKSFEKLAQENELTSNDKFVSWQNVVGAAKGIDTDVVQTDFYEYISEIATPTDFRKQ
YNSWYDNMLGITDESIEKSFYGSEKGLTENGIEPVDSYVVDDGWNNYRDSEFNANIGTES
AGNSMNRTGFWEFNDKFPNELYTSTELVQKLQSNFGVWLGPQGGYNYFSGFAKYLEKMGT
GYKQSDYWTNVCVGSDKYVKNLTNLFIDYQNRFDVDYWKIDGFAVRPCTNSAHDHMTGGT
NNMYYTTDLWENWIDAWEKMRENREAEGKDLFINATCYVNLSPWLLQWVNTVWVQDSGDT
GQTGTGERHQQKITYRDNVYYNLLKKNQVQFPLKNIYNHDPIYGVSDGSSATTEDFRDFL
FANAVRGTAFWELYYSPSIMDDEKWKVNADALDFAESNADILQNAKLFGNNPTQGVYGYS
SWSGDEGIISFRNPTGQEQTFTLQLTDVIGVPKTVSNLKSNQILPYIAGVGDSISYGDSV
TVNLEPYETRIIQYGNKDTEGAKIISSKVTGDKEITIKYNERVENIKDAYSIEGNKITES
ELLDDYRTIVINTENTLVGNVELNINGEKDSLGNSTEESLNIPVFDDSNIVVVKSNKDLV
GAEDINKKYNGNLDMFFMDINKAYEVDTDKSFEGTTDFSINMSVKFTGKDVNLFKQGDDI
SLSIDEEGYINFKVKDLTVNSKSNVTTVVDKAHGTFGTDAYVPTSTVTKEVGKINDGEIH
QVIAVREVNGMLKIYIDGALVNSIYNGSVINQSIDKDNILIGDSNFEGSIGRVELKNTSI
YYDEVKLDYSKYAEESIIKYNRDGWTATACSEMTGTTGDAAASAAIDGNENSWWHTNYVG
GDNHQGNHWISIDFGEEISLDTVKLLQRGSSSNGTIKQYKLEAKINGEWKIVKEDIFTEG
VNSIIELDESINATAIKITSISTFNGNNFAAIKEIYVSEKDRLATEDEINDAVNSVKEID
ESNYTIATVNNYKEIVSKISNVENINTRALKALKDEIKLAYDLLLESKALNELLIEGELL
KEDNYTEDSWTAFLSEFLKAKSVVENILSTREEIDYSTEKLGKAINDLIEIEKNILDTKE
LEEAIENANLINAEELIKISADIKNEFIESLEEAKNIINLVINKEEVKQEDIDLITDRLI
NAINAVIEELNKESNPGEQSKPEEGNKPAEGTNPGQQTNTSTPNKSIESSGESDKVRNND
ELPNTGGMPTSSIALLGVLTSLFGGFMIKKRIKNKE

Enzyme Prediction     

No EC number prediction in MGYG000004230_01242.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM32	1233	1356	1.5e-18	0.9112903225806451

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam00754	F5_F8_type_C	5.32e-17	1226	1355	1	127	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam00754	F5_F8_type_C	2.95e-08	136	247	16	110	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057	FA58C	2.85e-06	136	252	27	131	Substituted updates: Jan 31, 2002
COG0419	SbcC	1.70e-05	1358	1573	210	432	DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair].
TIGR01167	LPXTG_anchor	6.59e-05	1621	1654	1	34	LPXTG-motif cell wall anchor domain. This model describes the LPXTG motif-containing region found at the C-terminus of many surface proteins of Streptococcus and Streptomyces species. Cleavage between the Thr and Gly by sortase or a related enzyme leads to covalent anchoring at the new C-terminal Thr to the cell wall. Hits that do not lie at the C-terminus or are not found in Gram-positive bacteria are probably false-positive. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region. [Cell envelope, Other]

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ABG83191.1	0.0	1	1488	1	1490
SQG39183.1	0.0	1	1488	1	1490
AQW23840.1	0.0	1	1488	1	1490
AOY54034.1	0.0	1	1488	1	1490
AXH52486.1	0.0	1	1488	1	1490

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
2V72_A	4.34e-12	1226	1359	9	143	Thestructure of the family 32 CBM from C. perfringens NanJ in complex with galactose [Clostridium perfringens]
1W8N_A	6.10e-06	1239	1357	477	597	Contributionof the Active Site Aspartic Acid to Catalysis in the Bacterial Neuraminidase from Micromonospora viridifaciens. [Micromonospora viridifaciens],1W8O_A Contribution of the Active Site Aspartic Acid to Catalysis in the Bacterial Neuraminidase from Micromonospora viridifaciens [Micromonospora viridifaciens]
1WCQ_A	6.10e-06	1239	1357	477	597	Mutagenesisof the Nucleophilic Tyrosine in a Bacterial Sialidase to Phenylalanine. [Micromonospora viridifaciens],1WCQ_B Mutagenesis of the Nucleophilic Tyrosine in a Bacterial Sialidase to Phenylalanine. [Micromonospora viridifaciens],1WCQ_C Mutagenesis of the Nucleophilic Tyrosine in a Bacterial Sialidase to Phenylalanine. [Micromonospora viridifaciens]
2BER_A	6.10e-06	1239	1357	477	597	Y370GActive Site Mutant of the Sialidase from Micromonospora viridifaciens in complex with beta-Neu5Ac (sialic acid). [Micromonospora viridifaciens]
2BZD_A	6.10e-06	1239	1357	477	597	Galactoserecognition by the carbohydrate-binding module of a bacterial sialidase. [Micromonospora viridifaciens],2BZD_B Galactose recognition by the carbohydrate-binding module of a bacterial sialidase. [Micromonospora viridifaciens],2BZD_C Galactose recognition by the carbohydrate-binding module of a bacterial sialidase. [Micromonospora viridifaciens]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.001727	0.997273	0.000262	0.000270	0.000225	0.000204

TMHMM  Annotations     

start	end
1626	1648