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CAZyme Information: MGYG000004230_01299
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Clostridium sp900759995 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sp900759995 | |||||||||||
| CAZyme ID | MGYG000004230_01299 | |||||||||||
| CAZy Family | CBM32 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 14064; End: 17486 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM32 | 852 | 967 | 2.9e-17 | 0.8790322580645161 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00754 | F5_F8_type_C | 8.63e-16 | 847 | 966 | 1 | 120 | F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. |
| pfam08305 | NPCBM | 2.15e-10 | 47 | 185 | 3 | 135 | NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.) |
| cd00057 | FA58C | 1.57e-09 | 832 | 964 | 2 | 134 | Substituted updates: Jan 31, 2002 |
| smart00776 | NPCBM | 1.83e-05 | 51 | 186 | 23 | 145 | This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AMN35280.1 | 5.65e-164 | 27 | 985 | 26 | 990 |
| AQW23377.1 | 1.75e-161 | 27 | 985 | 26 | 990 |
| ATD49073.1 | 1.99e-161 | 27 | 985 | 31 | 995 |
| BCL58565.1 | 1.42e-147 | 41 | 1138 | 81 | 1199 |
| VTP91146.1 | 1.08e-130 | 32 | 985 | 132 | 1101 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4LKS_A | 6.92e-10 | 836 | 968 | 17 | 155 | Structureof CBM32-3 from a family 31 glycoside hydrolase from Clostridium perfringens in complex with galactose [Clostridium perfringens ATCC 13124],4LKS_C Structure of CBM32-3 from a family 31 glycoside hydrolase from Clostridium perfringens in complex with galactose [Clostridium perfringens ATCC 13124],4LQR_A Structure of CBM32-3 from a family 31 glycoside hydrolase from Clostridium perfringens [Clostridium perfringens ATCC 13124],4P5Y_A Structure of CBM32-3 from a family 31 glycoside hydrolase from Clostridium perfringens in complex with N-acetylgalactosamine [Clostridium perfringens ATCC 13124] |
| 2J7M_A | 2.98e-07 | 845 | 981 | 8 | 148 | Characterizationof a Family 32 CBM [Clostridium perfringens] |
| 2J1A_A | 3.05e-07 | 845 | 981 | 9 | 149 | Structureof CBM32 from Clostridium perfringens beta-N- acetylhexosaminidase GH84C in complex with galactose [Clostridium perfringens ATCC 13124],2J1E_A High Resolution Crystal Structure of CBM32 from a N-acetyl-beta- hexosaminidase in complex with lacNAc [Clostridium perfringens ATCC 13124] |
| 3ECQ_A | 7.80e-07 | 656 | 919 | 1269 | 1531 | Endo-alpha-N-acetylgalactosaminidasefrom Streptococcus pneumoniae: SeMet structure [Streptococcus pneumoniae R6],3ECQ_B Endo-alpha-N-acetylgalactosaminidase from Streptococcus pneumoniae: SeMet structure [Streptococcus pneumoniae R6] |
| 2V5D_A | 4.32e-06 | 845 | 981 | 596 | 736 | Structureof a Family 84 Glycoside Hydrolase and a Family 32 Carbohydrate-Binding Module in Tandem from Clostridium perfringens. [Clostridium perfringens] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q2MGH6 | 5.86e-12 | 656 | 968 | 1305 | 1615 | Endo-alpha-N-acetylgalactosaminidase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=SP_0368 PE=1 SV=1 |
| Q8DR60 | 1.73e-11 | 656 | 1012 | 1305 | 1664 | Endo-alpha-N-acetylgalactosaminidase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=spr0328 PE=1 SV=1 |
| Q0TR53 | 1.73e-06 | 845 | 995 | 626 | 780 | O-GlcNAcase NagJ OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) OX=195103 GN=nagJ PE=1 SV=1 |
| Q8XL08 | 2.26e-06 | 845 | 995 | 626 | 780 | O-GlcNAcase NagJ OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=nagJ PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.002744 | 0.994861 | 0.001189 | 0.000550 | 0.000338 | 0.000286 |
