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CAZyme Information: MGYG000004230_01906

You are here: Home > Sequence: MGYG000004230_01906

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium sp900759995
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sp900759995
CAZyme ID MGYG000004230_01906
CAZy Family CBM51
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1435 161202.59 4.6868
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004230 3516057 MAG United Kingdom Europe
Gene Location Start: 8522;  End: 12829  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004230_01906.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM51 67 213 2.9e-25 0.9925373134328358
CBM32 891 1009 9.1e-18 0.9193548387096774

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08305 NPCBM 8.23e-28 66 214 2 136
NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
smart00776 NPCBM 1.88e-15 63 213 1 144
This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.
pfam00754 F5_F8_type_C 8.23e-14 892 1008 4 120
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057 FA58C 1.80e-05 892 1008 17 136
Substituted updates: Jan 31, 2002
PRK08581 PRK08581 0.001 1325 1406 37 118
amidase domain-containing protein.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCL58565.1 1.75e-315 68 1165 82 1191
SQG16429.1 1.60e-291 63 1086 139 1158
VED84782.1 1.60e-291 63 1086 139 1158
QTZ58125.1 5.94e-291 63 1086 137 1156
VTP91146.1 6.32e-291 63 1086 139 1158

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2VMH_A 3.15e-16 62 213 4 150
Thestructure of CBM51 from Clostridium perfringens GH95 [Clostridium perfringens]
2VMG_A 3.68e-16 62 213 10 156
Thestructure of CBM51 from Clostridium perfringens GH95 in complex with methyl-galactose [Clostridium perfringens]
2VMI_A 1.09e-15 62 213 4 150
Thestructure of seleno-methionine labelled CBM51 from Clostridium perfringens GH95 [Clostridium perfringens]
7JRM_A 4.71e-10 69 252 86 247
ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
7JRL_A 5.00e-10 69 252 108 269
ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.004378 0.984316 0.010442 0.000365 0.000262 0.000211

TMHMM  Annotations      download full data without filtering help

start end
1411 1430