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CAZyme Information: MGYG000004230_02665

You are here: Home > Sequence: MGYG000004230_02665

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium sp900759995
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sp900759995
CAZyme ID MGYG000004230_02665
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
407 46004.33 6.3612
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004230 3516057 MAG United Kingdom Europe
Gene Location Start: 4011;  End: 5234  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004230_02665.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00877 NLPC_P60 1.17e-24 292 404 3 105
NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.
COG0791 Spr 2.55e-24 268 395 66 190
Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis].
PRK10838 spr 3.09e-14 297 405 85 184
bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase.
NF033741 NlpC_p60_RipA 7.75e-11 262 383 304 434
NlpC/P60 family peptidoglycan endopeptidase RipA.
PRK13914 PRK13914 4.19e-10 268 392 357 471
invasion associated endopeptidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QAX89037.1 4.78e-157 39 405 3 369
QDB01094.1 6.78e-157 39 405 3 369
AIW54496.1 3.63e-156 21 405 5 387
CDH92482.1 3.63e-156 21 405 5 387
AIW54800.1 3.63e-156 21 405 5 387

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2K1G_A 1.35e-12 297 405 24 123
SolutionNMR structure of lipoprotein spr from Escherichia coli K12. Northeast Structural Genomics target ER541-37-162 [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40767 4.75e-38 277 407 343 473
Peptidoglycan DL-endopeptidase CwlO OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlO PE=1 SV=2
Q65NQ9 3.32e-37 275 407 322 452
Peptidoglycan DL-endopeptidase CwlO OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=cwlO PE=3 SV=1
P0AFV5 8.92e-12 266 405 55 184
Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=mepS PE=3 SV=1
P0AFV6 8.92e-12 266 405 55 184
Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase OS=Escherichia coli O157:H7 OX=83334 GN=mepS PE=3 SV=1
P0AFV7 8.92e-12 266 405 55 184
Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase OS=Shigella flexneri OX=623 GN=mepS PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999961 0.000056 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

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