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CAZyme Information: MGYG000004244_01052

You are here: Home > Sequence: MGYG000004244_01052

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1601 sp900553335
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; UMGS1601; UMGS1601 sp900553335
CAZyme ID MGYG000004244_01052
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
578 MGYG000004244_7|CGC3 63049.12 4.5352
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004244 1985528 MAG United Kingdom Europe
Gene Location Start: 35875;  End: 37611  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004244_01052.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 46 506 5.3e-135 0.9824561403508771

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14587 Glyco_hydr_30_2 3.18e-20 53 362 18 359
O-Glycosyl hydrolase family 30.
cd14256 Dockerin_I 4.26e-11 516 570 1 55
Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.
COG5520 XynC 7.70e-07 1 509 1 429
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam02057 Glyco_hydro_59 1.70e-05 68 373 21 267
Glycosyl hydrolase family 59.
pfam00404 Dockerin_1 1.09e-04 517 563 1 47
Dockerin type I repeat. The dockerin repeat is the binding partner of the cohesin domain pfam00963. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. The dockerin repeats, each bearing homology to the EF-hand calcium-binding loop bind calcium.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADU23821.1 2.56e-140 25 519 24 509
QTE67528.1 5.22e-124 34 508 31 510
ADL35667.1 5.33e-110 34 508 88 606
AOZ97766.1 2.47e-108 34 508 60 581
CBK73885.1 3.02e-103 28 517 940 1484

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CLW_A 9.48e-13 68 237 39 206
Crystalstructure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_B Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_C Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_D Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_E Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_F Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343]
6M5Z_A 1.73e-10 34 466 24 417
ChainA, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]
4FMV_A 6.79e-07 170 513 99 391
CrystalStructure Analysis of a GH30 Endoxylanase from Clostridium papyrosolvens C71 [Ruminiclostridium papyrosolvens DSM 2782]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q76FP5 2.29e-34 29 511 18 476
Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1
A0A401ETL2 8.28e-27 4 512 6 641
Exo-beta-1,6-galactobiohydrolase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=bl1,6Gal PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000236 0.999173 0.000169 0.000165 0.000134 0.000122

TMHMM  Annotations      download full data without filtering help

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