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CAZyme Information: MGYG000004270_00745

You are here: Home > Sequence: MGYG000004270_00745

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Porphyromonas_A sp900554935
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas_A; Porphyromonas_A sp900554935
CAZyme ID MGYG000004270_00745
CAZy Family CE11
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
476 52724.99 6.5054
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004270 1411320 MAG China Asia
Gene Location Start: 2544;  End: 3974  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004270_00745.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE11 14 234 1.6e-71 0.8081180811808119

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK13188 PRK13188 0.0 12 472 3 464
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed
pfam03331 LpxC 3.10e-119 14 309 1 271
UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A.
PRK13186 lpxC 9.60e-110 13 310 3 275
UDP-3-O-acyl-N-acetylglucosamine deacetylase.
COG0774 LpxC 3.04e-90 13 312 3 280
UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell wall/membrane/envelope biogenesis].
TIGR00325 lpxC 4.35e-68 13 329 2 292
UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VEJ03317.1 1.07e-241 13 469 7 463
AST54919.1 1.24e-218 12 470 2 460
QJE30768.1 1.24e-218 12 470 2 460
QUT94149.1 1.24e-218 12 470 2 460
QCY57342.1 1.24e-218 12 470 2 460

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5VWM_A 2.69e-46 2 310 89 374
Crystalstructure of UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (LpxC) from Pseudomonas aeruginosa in complex with CHIR-090 inhibitor [Pseudomonas aeruginosa PAO1]
5U39_A 1.16e-45 9 310 1 279
Pseudomonasaeruginosa LpxC in complex with CHIR-090 [Pseudomonas aeruginosa PAO1]
6MO4_A 2.77e-45 11 310 5 281
Co-Crystalstructure of P. aeruginosa LpxC-50067 complex [Pseudomonas aeruginosa PAO1]
6MO5_A 2.85e-45 11 310 6 282
Co-Crystalstructure of P. aeruginosa LpxC-50228 complex [Pseudomonas aeruginosa PAO1],6MOD_A Co-Crystal structure of P. aeruginosa LpxC-50432 complex [Pseudomonas aeruginosa]
4J3D_A 4.62e-45 13 310 3 277
Pseudomonasaeruginosa LpxC in complex with a hydroxamate inhibitor [Pseudomonas aeruginosa PAO1],4J3D_B Pseudomonas aeruginosa LpxC in complex with a hydroxamate inhibitor [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q7MXT8 7.63e-214 12 472 2 462
Bifunctional enzyme LpxC/FabZ OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) OX=242619 GN=lpxC/fabZ PE=3 SV=1
Q8A015 5.05e-207 13 470 3 460
Bifunctional enzyme LpxC/FabZ OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=lpxC/fabZ PE=3 SV=1
Q8KBX0 7.01e-111 14 468 5 463
Bifunctional enzyme LpxC/FabZ OS=Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS) OX=194439 GN=lpxC/fabZ PE=3 SV=1
Q1D2K0 1.28e-54 10 310 4 279
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Myxococcus xanthus (strain DK1622) OX=246197 GN=lpxC PE=3 SV=1
B1XT16 5.57e-53 13 337 3 302
UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Polynucleobacter necessarius subsp. necessarius (strain STIR1) OX=452638 GN=lpxC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000058 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004270_00745.