CAZyme Information: MGYG000004275_01158

Basic Information

• Species: Ruminococcus_C sp000437175
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_C; Ruminococcus_C sp000437175
• CAZyme ID: MGYG000004275_01158
• CAZy Family: GH59
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
964		108671.39	4.4886

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004275	2279760	MAG	China	Asia

• Gene Location: Start: 5986; End: 8880 Strand: +

Full Sequence      

MDFSMKNSKFVNKYFSELMDRSNAAPMEIIADGTQANENPAACYRGFGCVSANNSSRLLL
DYKAEHPQAYEEIMRLLFQKNYGACLTHIKLELGADINSSSGTEPATKRSANEPADVTRG
AGFQFAADAKAINPDITVDFLRWGEPGWVTHAFTISQENGLSARYRWYKETLDAAYAVYG
LKFDYISADQNETDTPDEAWILYLRYRLDHETNAPYDYSKIKIIASDEVGSRNIAEQMVD
NSVLRNAVDVIGLHYTTFGDSYTNLLNEAYGKEIWYSEGIAPCNVPELTVQADQSGLIGR
NGPIDVANRIINSYYNGKMTMYEFQPAVASYYNGSCYSPKQLIRAWEPWSGHYVLDIGFW
MAMHFSRFSQKGWMFINGACYGDGEEDHAITNTTHNFMTLTAPDRSELSMFFTNESEEPR
IYNVQIKDMAFQDAALSTVITRGPSGRQSYDANWFQRGKTIRCSKNKHGIFTVKVPPQSI
MTVTTLDTSWVNGVNTFSGIQPPSSARLTLPYRDRLEYTKEEICVRGCAPRYMTDQGGAF
ELIETAEDGYVICQRISRQILPTNWRFRGTPLPLTSFGDDKWHSYSAEVDVRLANLDENN
FAGIGVRYNSAVTCEFSSMCGYTGRLYGDGSWKLMDMENVAAEGILSQVNPKEWNHLKLI
VLGNSIFFFINGNFLTKYTPQCMINSGRVSLCSDYSWNMFRNIAVEPVRLQPLYVRRIDC
FGDNILYNENWEIHAMESYMFYNRTSMEAKAGAEFSCTFEGTGISIIGTAKNAEFTVLID
GHTIYENFFVPSSLPRQACLILDQLPEGVHSMRVFLNHGEFRLDVLEIPEPYSRMTDTLM
IPKEVRAEMTEEQQQEQYRRRFVADTMDAEAMLWHMEHPFTQPPEPEKTEFPAEQPAAPE
SEHSDAESTENPVTAESEATESAAETEAALSDSEPTSVPEEPAAPTTTEESTADADDSAG
LPEV

Enzyme Prediction     

No EC number prediction in MGYG000004275_01158.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH59	41	706	6.1e-178	0.9889064976228209

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam02057	Glyco_hydro_59	2.17e-136	44	367	1	293	Glycosyl hydrolase family 59.
NF033913	fibronec_FbpA	4.67e-07	883	955	164	256	LPXTG-anchored fibronectin-binding protein FbpA. FbpA, a fibronectin-binding protein described in Streptococcus pyogenes, has a YSIRK-type (crosswall-targeting) signal peptide and a C-terminal LPXTG motif for covalent attachment to the cell wall. It is unrelated to the PavA-like protein from Streptococcus gordonii (see BlastRule NBR009716) that was given the identical name, so the phase LPXTG-anchored is added to the protein name for clarity.
NF033913	fibronec_FbpA	3.15e-05	879	952	233	312	LPXTG-anchored fibronectin-binding protein FbpA. FbpA, a fibronectin-binding protein described in Streptococcus pyogenes, has a YSIRK-type (crosswall-targeting) signal peptide and a C-terminal LPXTG motif for covalent attachment to the cell wall. It is unrelated to the PavA-like protein from Streptococcus gordonii (see BlastRule NBR009716) that was given the identical name, so the phase LPXTG-anchored is added to the protein name for clarity.
COG5520	XynC	5.06e-05	130	373	110	340	O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
PRK00404	tatB	3.98e-04	866	942	70	141	Sec-independent protein translocase subunit TatB.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCN31742.1	9.35e-209	27	837	6	828
CCO04392.1	1.25e-205	28	828	43	838
CBL34686.1	4.84e-205	11	851	5	827
CBK96504.1	1.79e-203	11	832	5	808
CBL16905.1	4.94e-187	45	828	4	780

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4CCC_A	6.76e-38	44	709	25	654	StructureOf Mouse Galactocerebrosidase With 4nbdg: Enzyme-substrate Complex [Mus musculus],4CCD_A Structure Of Mouse Galactocerebrosidase With D-galactal: Enzyme-intermediate Complex [Mus musculus],4CCE_A Structure Of Mouse Galactocerebrosidase With Galactose: Enzyme-product Complex [Mus musculus],4UFH_A Mouse Galactocerebrosidase complexed with iso-galacto-fagomine IGF [Mus musculus],4UFI_A Mouse Galactocerebrosidase complexed with aza-galacto-fagomine AGF [Mus musculus],4UFJ_A Mouse Galactocerebrosidase complexed with iso-galacto-fagomine lactam IGL [Mus musculus],4UFK_A Mouse Galactocerebrosidase complexed with dideoxy-imino-lyxitol DIL [Mus musculus],4UFL_A Mouse Galactocerebrosidase complexed with deoxy-galacto-noeurostegine DGN [Mus musculus],4UFM_A Mouse Galactocerebrosidase complexed with 1-deoxy-galacto-nojirimycin DGJ [Mus musculus],5NXB_A Mouse galactocerebrosidase in complex with saposin A [Mus musculus],5NXB_B Mouse galactocerebrosidase in complex with saposin A [Mus musculus],6Y6S_A Chain A, Galactocerebrosidase [Mus musculus],6Y6T_A Chain A, Galactocerebrosidase [Mus musculus]
3ZR5_A	6.89e-38	44	709	27	656	STRUCTUREOF GALACTOCEREBROSIDASE FROM MOUSE [Mus musculus],3ZR6_A STRUCTURE OF GALACTOCEREBROSIDASE FROM MOUSE IN COMPLEX WITH GALACTOSE [Mus musculus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P54818	4.78e-37	44	709	55	684	Galactocerebrosidase OS=Mus musculus OX=10090 GN=Galc PE=1 SV=2
Q5SNX7	9.30e-36	44	705	33	657	Galactocerebrosidase OS=Danio rerio OX=7955 GN=galc PE=2 SV=1
P54804	4.20e-35	44	709	39	669	Galactocerebrosidase OS=Canis lupus familiaris OX=9615 GN=GALC PE=1 SV=1
Q0VA39	7.98e-35	44	706	47	673	Galactocerebrosidase OS=Xenopus tropicalis OX=8364 GN=galc PE=2 SV=1
O02791	2.63e-34	44	709	55	685	Galactocerebrosidase OS=Macaca mulatta OX=9544 GN=GALC PE=1 SV=2

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000045	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004275_01158.