CAZyme Information: MGYG000004281_00004

Basic Information

• Species: Parabacteroides sp900552465
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp900552465
• CAZyme ID: MGYG000004281_00004
• CAZy Family: GH78
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
582	MGYG000004281_1|CGC1	65247.03	6.4515

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004281	4813571	MAG	China	Asia

• Gene Location: Start: 4535; End: 6283 Strand: -

Full Sequence      

MKIQLILISLFLTVSLSAQQRDSRVREYLPPVRIVWQQESGLIQGADYLLLPGNGQSDLA
NHTICKMTSTDKQHPAILLDFGKELQGGLQIVTGMPASHEPVAIRVRFGESVSEAMCEID
GVNGATNDHAMRDFTIRLPWLGVMEVGNSGFRFVRIDLLDDSADLHLKEVRAISTFRDIP
YKGSFRCNDERLNKIWKTGAYTVHLNMQEYLWDGIKRDRLVWVGDLHPEVMTVNTVFGYN
EVVPKSLDLIRDITPLPEWMNGISSYSIWWLLIHRDWYYYHGDLVYLKEQKPYMTALLRH
LISKVDVDGVEKLDGNRFLDWPSNANPMAINAGLQALMVQAMKAGNELCTVLGENALASE
CQAMMEKMVKAAPKVTKPLLKSGVAPDAPGSKQAASLLALAGLMKPEEANRKYLSVNGPK
GFSTFYGYYMLRAMAAAGDYRGAIDVIRQYWGAMIDLGATTFWEDFNMEWLPDASRIDEL
VPAGKKDIHGDYGAYCYKGFRHSLCHGWASGPTSWLSEYVLGVQVVEPGCRTVRITPHLG
DLEWVEGTFPTPYGVITIRHERGADGQVKSRIDVPAEVKIIQ

Enzyme Prediction     

No EC number prediction in MGYG000004281_00004.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	76	579	5.6e-107	0.9742063492063492

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	1.37e-15	183	520	4	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam17390	Bac_rhamnosid_C	1.11e-08	522	579	1	58	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT48045.1	0.0	1	582	1	583
QUR50485.1	0.0	15	580	16	580
QUT54421.1	0.0	15	580	16	580
QUT19201.1	0.0	15	580	16	580
QJE27358.1	0.0	15	580	16	580

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3CIH_A	5.09e-47	67	558	184	674	Crystalstructure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]
4XHC_A	5.95e-19	76	521	94	543	ChainA, Alpha-L-rhamnosidase [Klebsiella oxytoca],4XHC_B Chain B, Alpha-L-rhamnosidase [Klebsiella oxytoca]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000200	0.999193	0.000154	0.000146	0.000130	0.000124

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004281_00004.