logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004281_00820

You are here: Home > Sequence: MGYG000004281_00820

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides sp900552465
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp900552465
CAZyme ID MGYG000004281_00820
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
999 MGYG000004281_7|CGC1 113405.2 6.7077
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004281 4813571 MAG China Asia
Gene Location Start: 12722;  End: 15721  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004281_00820.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 45 868 1.1e-132 0.9534574468085106

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10340 ebgA 3.43e-92 50 862 43 872
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250 LacZ 7.37e-76 37 446 1 429
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK09525 lacZ 6.98e-60 50 446 54 485
beta-galactosidase.
PRK10150 PRK10150 8.17e-44 35 448 3 447
beta-D-glucuronidase; Provisional
pfam02836 Glyco_hydro_2_C 6.37e-37 292 605 1 300
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT50213.1 0.0 1 999 1 994
QCQ48019.1 0.0 4 998 3 999
QKH86406.1 0.0 4 998 3 999
QCQ34661.1 0.0 4 998 3 999
QCQ30210.1 0.0 4 998 3 999

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6S6Z_A 8.39e-61 49 873 39 869
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 8.43e-61 49 873 40 870
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3DEC_A 5.82e-58 51 645 47 650
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3BGA_A 2.69e-56 51 652 51 661
Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
3I3B_A 4.02e-46 51 666 54 683
ChainA, Beta-galactosidase [Escherichia coli K-12],3I3B_B Chain B, Beta-galactosidase [Escherichia coli K-12],3I3B_C Chain C, Beta-galactosidase [Escherichia coli K-12],3I3B_D Chain D, Beta-galactosidase [Escherichia coli K-12],3I3D_A Chain A, Beta-galactosidase [Escherichia coli K-12],3I3D_B Chain B, Beta-galactosidase [Escherichia coli K-12],3I3D_C Chain C, Beta-galactosidase [Escherichia coli K-12],3I3D_D Chain D, Beta-galactosidase [Escherichia coli K-12],3I3E_A Chain A, Beta-galactosidase [Escherichia coli K-12],3I3E_B Chain B, Beta-galactosidase [Escherichia coli K-12],3I3E_C Chain C, Beta-galactosidase [Escherichia coli K-12],3I3E_D Chain D, Beta-galactosidase [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56307 4.62e-60 49 873 40 870
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
O52847 9.21e-57 51 862 61 904
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
A9MQ82 1.44e-48 23 667 64 688
Beta-galactosidase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) OX=41514 GN=lacZ PE=3 SV=2
Q8D4H3 1.88e-47 62 546 76 570
Beta-galactosidase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=lacZ PE=3 SV=2
A0KQH4 5.68e-47 89 611 126 634
Beta-galactosidase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049) OX=380703 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000361 0.998104 0.000972 0.000215 0.000183 0.000156

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004281_00820.