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CAZyme Information: MGYG000004282_00350

You are here: Home > Sequence: MGYG000004282_00350

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus_D sp000434695
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_D; Ruminococcus_D sp000434695
CAZyme ID MGYG000004282_00350
CAZy Family GH59
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
896 MGYG000004282_1|CGC5 97696.25 4.3078
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004282 2340138 MAG China Asia
Gene Location Start: 379891;  End: 382581  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004282_00350.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH59 55 710 4.6e-184 0.9857369255150554

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02057 Glyco_hydro_59 2.72e-137 57 376 1 292
Glycosyl hydrolase family 59.
pfam13385 Laminin_G_3 0.009 588 710 17 140
Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CCO04392.1 8.04e-236 25 894 27 891
BCN31742.1 1.05e-224 42 830 8 818
CBL34686.1 1.03e-221 42 831 21 808
CBK96504.1 2.65e-220 42 831 21 808
CBL16905.1 2.08e-213 58 830 4 779

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4CCC_A 2.42e-34 57 667 25 607
StructureOf Mouse Galactocerebrosidase With 4nbdg: Enzyme-substrate Complex [Mus musculus],4CCD_A Structure Of Mouse Galactocerebrosidase With D-galactal: Enzyme-intermediate Complex [Mus musculus],4CCE_A Structure Of Mouse Galactocerebrosidase With Galactose: Enzyme-product Complex [Mus musculus],4UFH_A Mouse Galactocerebrosidase complexed with iso-galacto-fagomine IGF [Mus musculus],4UFI_A Mouse Galactocerebrosidase complexed with aza-galacto-fagomine AGF [Mus musculus],4UFJ_A Mouse Galactocerebrosidase complexed with iso-galacto-fagomine lactam IGL [Mus musculus],4UFK_A Mouse Galactocerebrosidase complexed with dideoxy-imino-lyxitol DIL [Mus musculus],4UFL_A Mouse Galactocerebrosidase complexed with deoxy-galacto-noeurostegine DGN [Mus musculus],4UFM_A Mouse Galactocerebrosidase complexed with 1-deoxy-galacto-nojirimycin DGJ [Mus musculus],5NXB_A Mouse galactocerebrosidase in complex with saposin A [Mus musculus],5NXB_B Mouse galactocerebrosidase in complex with saposin A [Mus musculus],6Y6S_A Chain A, Galactocerebrosidase [Mus musculus],6Y6T_A Chain A, Galactocerebrosidase [Mus musculus]
3ZR5_A 2.45e-34 57 667 27 609
STRUCTUREOF GALACTOCEREBROSIDASE FROM MOUSE [Mus musculus],3ZR6_A STRUCTURE OF GALACTOCEREBROSIDASE FROM MOUSE IN COMPLEX WITH GALACTOSE [Mus musculus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5SNX7 2.40e-38 57 711 33 658
Galactocerebrosidase OS=Danio rerio OX=7955 GN=galc PE=2 SV=1
B5X3C1 1.94e-36 57 710 37 662
Galactocerebrosidase OS=Salmo salar OX=8030 GN=galc PE=2 SV=1
O02791 6.95e-34 57 667 55 638
Galactocerebrosidase OS=Macaca mulatta OX=9544 GN=GALC PE=1 SV=2
P54804 8.31e-34 57 676 39 631
Galactocerebrosidase OS=Canis lupus familiaris OX=9615 GN=GALC PE=1 SV=1
Q0VA39 1.56e-33 57 667 47 629
Galactocerebrosidase OS=Xenopus tropicalis OX=8364 GN=galc PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000273 0.998985 0.000226 0.000171 0.000167 0.000153

TMHMM  Annotations      download full data without filtering help

start end
869 888