CAZyme Information: MGYG000004286_01173

Basic Information

• Species: Collinsella sp002232035
• Lineage: Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp002232035
• CAZyme ID: MGYG000004286_01173
• CAZy Family: GH106
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
862	MGYG000004286_22|CGC1	93494.79	4.856

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004286	2166768	MAG	China	Asia

• Gene Location: Start: 23950; End: 26538 Strand: +

Full Sequence      

MTAYYQQVLNGAYDNHVLPFLWMKGESHKTIAEYLEKIAGADIHEVCLESRPHPDFCGEG
WWRDLRFAIDICKQLGLKIWILDDAHFPTGYANGAVKEAAPELRKIVLTHRTLDIVGPTP
QANIVLTNLFDKTERFYGVTFMQEGHAVEVEHRVIEDEHGIPYHLVFDAPAGITQACVMF
TSGKTSYNEDYINMVDRASVAQLIDAVYEPHFTHLGDEFGKTILGFFSDEPGFANEKGVT
GADGISDTLIGKATAPLPWSAELKRRLRAALGERYLDELPHLWDREPAGAHVRHVYMDIA
STLYKECFCDQLGGWCRAHGVQYIGHVIEDKDCHARLGVGAGHYFRAVGGQDMAGVDIVI
NQLVPGMDQGFHSYGRGVWDLEFYNYVLPKLGSSAAHLDPKKQGRCMAEVFGAFGWHEGL
REMKWIADHFMVRGVNWFVPHAFSMAAFPDWDCPPHFYAHGQNPQFAHFGKLMSYMNRTA
SLLSGGRAATPVALLYHADAEWAGEASFMQHAAAELMRAQIDFDIVPAEAFEDAERYTVA
FTADGGFTVNGQAYRCLVMPGAEFVGGAVLDFAARAAAAGAAVYALDKLPSKRYDGDIAG
REGFASVDASELAGVCVVATSKLASVLAAAGMQTVACAEPQPWLRALRYERAGETYLMLV
NEHPKQGISTQIALADGTPVAGARLDLLNGTEPAAFDGTLELAPYESCIVVLGATGSAGA
TTAGTEAACIDGPWTVAFSTPGTDAFGESVELADLHDLSSAEFPGKAGTFRYQASFVLGE
AATRTVIDLGEVFETATVTLDGKSLGTRICPPYRFEAGALLAGEHALAIDIINTLDHAVP
DMFGMTEPSDPSGLLGPVRVLG

Enzyme Prediction     

No EC number prediction in MGYG000004286_01173.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	28	860	1.2e-69	0.9635922330097088

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17132	Glyco_hydro_106	1.54e-05	393	562	566	732	alpha-L-rhamnosidase.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AZH68834.1	0.0	1	862	1	863
ATP54541.1	0.0	12	862	3	850
QNM10672.1	1.58e-314	1	860	1	832
AGF57028.1	3.08e-250	8	861	7	846
AIQ48514.1	5.27e-208	7	860	6	865

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6Q2F_A	1.01e-07	728	861	986	1139	Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000061	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004286_01173.