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CAZyme Information: MGYG000004287_00028

You are here: Home > Sequence: MGYG000004287_00028

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Limosilactobacillus caviae
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Limosilactobacillus; Limosilactobacillus caviae
CAZyme ID MGYG000004287_00028
CAZy Family GH31
CAZyme Description Alpha-xylosidase XylQ
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
762 MGYG000004287_1|CGC1 87326.21 6.212
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004287 2159846 MAG China Asia
Gene Location Start: 81607;  End: 83895  Strand: +

Full Sequence      Download help

MKFTNGLWLI  KDNFDINSPA  QVYDYRISDD  NKKATIFVPY  KAVNNRDQTT  DVGATTIDVT60
SPLKNVLGIK  LTHFDQFPKQ  PSFHINDQHV  PMDADIKEND  HFTVKSGDLV  VTIPLGKQPF120
KMQFRGNGKL  LTSSEPGMQG  EITDRKSGKH  YMREALDLDV  SEYVYGLGER  FTHFVKNGQT180
VDTVNKDGGT  GSEQTYKNIP  FYLTNRGYGV  FVDQPETVSF  EVASEYNDKV  QFSVEGQSIQ240
YYVIYGPTPK  DILVNYTSLT  GKPALPPAWS  FGLWLTTSFT  TDYSEETVLN  IIDKMKENNI300
PLDVFHFDCF  WMKGFEWTSF  EWDKDMFPDP  AGLIKKIHDR  GIKVCVWLNP  YISQKSRLFK360
EARDQGYLIK  RPDGNPWQWD  RWQAGNAFVD  FTNPNAVKWY  QSYLKDLLNM  GVDAFKTDFG420
ERIPVKDAVY  FDGSDPKRMH  NYYTFLYNQT  VFNAIKEVKG  EKEAVVFARS  ATVGTQQFPV480
NWGGDSDSRY  TSMAASLRGG  LSFMSSGFGF  WSHDIGGFND  HCPSDLYKRW  TQFGLLSTHS540
RYHGSSEYRV  PWHYDKEAVN  VSRKFVKNKL  SLMPYLFEQA  VETHEHGYPM  MRPMFMEFPA600
DQGAETISTQ  YMLGSQLLVA  PIFNDRSEAK  YYLPTGKWTN  ILTNKSYNIS  TGQWINEKFD660
YMTLPLLARQ  NAILLTNPNA  EHAKYDYLTA  PELHVYQPTE  GTHTQDIVDE  EGNHHGQVSV720
SRNGDKITVD  TSAMNQLPKL  FVHLDDQVKT  FDLTDKIQSV  QL762

Enzyme Prediction      help

EC 3.2.1.177

CAZyme Signature Domains help

Created with Snap3876114152190228266304342381419457495533571609647685723241674GH31
Family Start End Evalue family coverage
GH31 241 674 6.1e-135 0.9976580796252927

CDD Domains      download full data without filtering help

Created with Snap387611415219022826630434238141945749553357160964768572316734YicI1671PRK10658261572GH31_xylosidase_YicI242674Glyco_hydro_3187655PRK10426
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1501 YicI 0.0 16 734 9 729
Alpha-glucosidase, glycosyl hydrolase family GH31 [Carbohydrate transport and metabolism].
PRK10658 PRK10658 0.0 1 671 1 665
putative alpha-glucosidase; Provisional
cd06593 GH31_xylosidase_YicI 0.0 261 572 1 308
alpha-xylosidase YicI-like. YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.
pfam01055 Glyco_hydro_31 5.09e-173 242 674 1 442
Glycosyl hydrolases family 31. Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Family 31 comprises of enzymes that are, or similar to, alpha- galactosidases.
PRK10426 PRK10426 9.70e-81 87 655 4 604
alpha-glucosidase; Provisional

CAZyme Hits      help

Created with Snap38761141521902282663043423814194574955335716096476857231762QZN93562.1|GH311762QHM66882.1|GH311762QHM68964.1|GH311762ABJ67288.1|GH311762QHM65163.1|GH31
Hit ID E-Value Query Start Query End Hit Start Hit End
QZN93562.1 0.0 1 762 1 762
QHM66882.1 0.0 1 762 1 760
QHM68964.1 0.0 1 762 1 760
ABJ67288.1 0.0 1 762 1 760
QHM65163.1 0.0 1 762 1 760

PDB Hits      download full data without filtering help

Created with Snap387611415219022826630434238141945749553357160964768572317292F2H_A17291XSI_A27291WE5_A1666785F7C_A1037345F7U_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
2F2H_A 6.23e-256 1 729 1 725
Structureof the YicI thiosugar Michaelis complex [Escherichia coli],2F2H_B Structure of the YicI thiosugar Michaelis complex [Escherichia coli],2F2H_C Structure of the YicI thiosugar Michaelis complex [Escherichia coli],2F2H_D Structure of the YicI thiosugar Michaelis complex [Escherichia coli],2F2H_E Structure of the YicI thiosugar Michaelis complex [Escherichia coli],2F2H_F Structure of the YicI thiosugar Michaelis complex [Escherichia coli]
1XSI_A 7.38e-256 1 729 1 725
Structureof a Family 31 alpha glycosidase [Escherichia coli],1XSI_B Structure of a Family 31 alpha glycosidase [Escherichia coli],1XSI_C Structure of a Family 31 alpha glycosidase [Escherichia coli],1XSI_D Structure of a Family 31 alpha glycosidase [Escherichia coli],1XSI_E Structure of a Family 31 alpha glycosidase [Escherichia coli],1XSI_F Structure of a Family 31 alpha glycosidase [Escherichia coli],1XSJ_A Structure of a Family 31 alpha glycosidase [Escherichia coli],1XSJ_B Structure of a Family 31 alpha glycosidase [Escherichia coli],1XSJ_C Structure of a Family 31 alpha glycosidase [Escherichia coli],1XSJ_D Structure of a Family 31 alpha glycosidase [Escherichia coli],1XSJ_E Structure of a Family 31 alpha glycosidase [Escherichia coli],1XSJ_F Structure of a Family 31 alpha glycosidase [Escherichia coli],1XSK_A Structure of a Family 31 alpha glycosidase glycosyl-enzyme intermediate [Escherichia coli],1XSK_B Structure of a Family 31 alpha glycosidase glycosyl-enzyme intermediate [Escherichia coli],1XSK_C Structure of a Family 31 alpha glycosidase glycosyl-enzyme intermediate [Escherichia coli],1XSK_D Structure of a Family 31 alpha glycosidase glycosyl-enzyme intermediate [Escherichia coli],1XSK_E Structure of a Family 31 alpha glycosidase glycosyl-enzyme intermediate [Escherichia coli],1XSK_F Structure of a Family 31 alpha glycosidase glycosyl-enzyme intermediate [Escherichia coli]
1WE5_A 2.41e-242 2 729 2 725
CrystalStructure of Alpha-Xylosidase from Escherichia coli [Escherichia coli],1WE5_B Crystal Structure of Alpha-Xylosidase from Escherichia coli [Escherichia coli],1WE5_C Crystal Structure of Alpha-Xylosidase from Escherichia coli [Escherichia coli],1WE5_D Crystal Structure of Alpha-Xylosidase from Escherichia coli [Escherichia coli],1WE5_E Crystal Structure of Alpha-Xylosidase from Escherichia coli [Escherichia coli],1WE5_F Crystal Structure of Alpha-Xylosidase from Escherichia coli [Escherichia coli]
5F7C_A 3.30e-114 166 678 206 719
Crystalstructure of Family 31 alpha-glucosidase (BT_0339) from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5F7C_B Crystal structure of Family 31 alpha-glucosidase (BT_0339) from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5F7C_C Crystal structure of Family 31 alpha-glucosidase (BT_0339) from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5F7C_D Crystal structure of Family 31 alpha-glucosidase (BT_0339) from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]
5F7U_A 3.86e-83 103 734 188 870
Cycloalternan-formingenzyme from Listeria monocytogenes in complex with pentasaccharide substrate [Listeria monocytogenes EGD-e]

Swiss-Prot Hits      download full data without filtering help

Created with Snap38761141521902282663043423814194574955335716096476857231762sp|P96793|XYLQ_LACPE1729sp|P31434|XYLS_ECOLI1714sp|Q5AW25|AGDD_EMENI64712sp|Q9F234|AGL2_BACTQ127701sp|Q9P999|XYLS_SACS2
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P96793 3.43e-310 1 762 1 762
Alpha-xylosidase XylQ OS=Lactiplantibacillus pentosus OX=1589 GN=xylQ PE=1 SV=1
P31434 3.30e-255 1 729 1 725
Alpha-xylosidase OS=Escherichia coli (strain K12) OX=83333 GN=yicI PE=1 SV=2
Q5AW25 5.03e-222 1 714 1 736
Alpha-xylosidase OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=agdD PE=1 SV=1
Q9F234 3.54e-76 64 712 54 711
Alpha-glucosidase 2 OS=Bacillus thermoamyloliquefaciens OX=1425 PE=3 SV=1
Q9P999 8.95e-63 127 701 70 649
Alpha-xylosidase OS=Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) OX=273057 GN=xylS PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000057 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004287_00028.