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CAZyme Information: MGYG000004295_02124

You are here: Home > Sequence: MGYG000004295_02124

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Providencia rettgeri
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Providencia; Providencia rettgeri
CAZyme ID MGYG000004295_02124
CAZy Family AA3
CAZyme Description Alcohol dehydrogenase [acceptor]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
537 MGYG000004295_48|CGC1 58717.65 6.7491
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004295 4142275 MAG Israel Asia
Gene Location Start: 26819;  End: 28432  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004295_02124.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 5 533 4.9e-161 0.9964788732394366

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK02106 PRK02106 0.0 1 530 1 531
choline dehydrogenase; Validated
COG2303 BetA 2.27e-171 1 534 3 537
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
TIGR03970 Rv0697 3.46e-103 7 530 2 486
dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function.
pfam00732 GMC_oxred_N 1.15e-53 6 295 1 217
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
pfam05199 GMC_oxred_C 2.37e-49 388 526 1 143
GMC oxidoreductase. This domain found associated with pfam00732.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CAB3230510.1 1.66e-127 5 532 24 557
QWC20507.1 1.71e-123 5 536 5 529
AWP09430.1 5.23e-112 5 530 19 550
ANI26486.1 4.35e-111 5 530 70 601
CAD7087596.1 1.36e-107 5 536 40 602

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6ZH7_A 1.21e-85 5 530 7 560
ChainA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
6YRU_AAA 1.21e-85 5 530 7 560
ChainAAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
6YS1_AAA 1.70e-85 5 530 7 560
ChainAAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
5NCC_A 1.79e-85 5 530 23 576
Structureof Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_B Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_C Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_D Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_E Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_F Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis]
6YS2_AAA 2.38e-85 5 530 7 560
ChainAAA, Fatty acid Photodecarboxylase [Chlorella variabilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q1QXE1 4.27e-133 5 527 6 532
Oxygen-dependent choline dehydrogenase 1 OS=Chromohalobacter salexigens (strain ATCC BAA-138 / DSM 3043 / CIP 106854 / NCIMB 13768 / 1H11) OX=290398 GN=betA1 PE=3 SV=1
Q4ZM63 1.23e-131 5 530 6 535
Oxygen-dependent choline dehydrogenase OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=betA PE=3 SV=1
Q88AE7 3.46e-131 5 530 6 535
Oxygen-dependent choline dehydrogenase OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=betA PE=3 SV=1
Q48CM7 6.90e-131 5 530 6 535
Oxygen-dependent choline dehydrogenase OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) OX=264730 GN=betA PE=3 SV=1
Q9L4K0 3.61e-128 3 530 4 533
Oxygen-dependent choline dehydrogenase OS=Chromohalobacter salexigens (strain ATCC BAA-138 / DSM 3043 / CIP 106854 / NCIMB 13768 / 1H11) OX=290398 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000030 0.000005 0.000001 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004295_02124.