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CAZyme Information: MGYG000004306_01351

You are here: Home > Sequence: MGYG000004306_01351

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; TANB77; CAG-465; CAG-465;
CAZyme ID MGYG000004306_01351
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
384 MGYG000004306_44|CGC1 43018.59 5.4745
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004306 1556997 MAG Israel Asia
Gene Location Start: 4995;  End: 6149  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004306_01351.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00877 NLPC_P60 1.63e-27 270 381 3 105
NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.
COG0791 Spr 3.31e-25 250 377 70 195
Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis].
PRK10838 spr 3.45e-17 288 383 93 185
bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase.
NF033742 NlpC_p60_RipB 2.41e-15 253 365 75 189
NlpC/P60 family peptidoglycan endopeptidase RipB.
NF033741 NlpC_p60_RipA 5.19e-15 253 364 326 437
NlpC/P60 family peptidoglycan endopeptidase RipA.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDB01094.1 7.54e-160 23 383 8 370
QAX89037.1 7.54e-160 23 383 8 370
AWS25316.1 2.86e-158 52 383 56 394
AMN32101.1 2.86e-158 52 383 56 394
AIW54496.1 3.29e-158 58 383 55 388

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2K1G_A 7.35e-14 275 384 24 125
SolutionNMR structure of lipoprotein spr from Escherichia coli K12. Northeast Structural Genomics target ER541-37-162 [Escherichia coli K-12]
3PBC_A 9.16e-13 253 354 83 185
ChainA, Invasion Protein [Mycobacterium tuberculosis]
3NE0_A 9.16e-13 253 354 83 185
Structureand functional regulation of RipA, a mycobacterial enzyme essential for daughter cell separation [Mycobacterium tuberculosis H37Rv]
4Q4T_A 5.82e-12 253 354 341 443
Structureof the Resuscitation Promoting Factor Interacting protein RipA mutated at E444 [Mycobacterium tuberculosis H37Rv]
3S0Q_A 1.45e-11 253 354 84 186
ChainA, INVASION PROTEIN [Mycobacterium tuberculosis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q65NQ9 5.65e-41 242 383 311 451
Peptidoglycan DL-endopeptidase CwlO OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=cwlO PE=3 SV=1
P40767 3.98e-38 255 383 343 472
Peptidoglycan DL-endopeptidase CwlO OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlO PE=1 SV=2
P0AFV7 1.26e-12 275 384 85 186
Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase OS=Shigella flexneri OX=623 GN=mepS PE=3 SV=1
P0AFV6 1.26e-12 275 384 85 186
Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase OS=Escherichia coli O157:H7 OX=83334 GN=mepS PE=3 SV=1
P0AFV4 1.26e-12 275 384 85 186
Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase OS=Escherichia coli (strain K12) OX=83333 GN=mepS PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.942953 0.033844 0.000325 0.000252 0.000136 0.022511

TMHMM  Annotations      download full data without filtering help

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