CAZyme Information: MGYG000004317_01522

Basic Information

• Species: Lachnospira sp900316325
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; Lachnospira sp900316325
• CAZyme ID: MGYG000004317_01522
• CAZy Family: PL9
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1105		119098.32	4.557

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004317	2482422	MAG	Israel	Asia

• Gene Location: Start: 13; End: 3330 Strand: +

Full Sequence      

MTAVTDSKITFVTKAASGKTMYFVEASASEQTISEEATEGSHTYSMSAGKTYYFYVSGSK
ACVYAISLEKGTPDLDWSKVESPVLETPVVDGSKVSVGWNAPLGDDGGEQLVVNMYSGEK
VVDSKIIKGSNSKGTAEFNPTATGDYTFKAVLSRSGEKDKESNEVKAEGFVLPLAAPSNL
FATSKGNGKMLIEWDAVPEADSYEVSYSTDGTTYSEAVTATDTKQLLSGLTVGTEYTFKV
VAVRNNPATKKEAIVKGTATADEIRKWGSVTYGNGHEDGKDTSKDSITGSALDGSVTIKS
ASGKIVPDSYDGLTFYYTEIPTTENFILRAKVKVNSWKLSNGQEGFGLMATDRLGGSGWN
NQYMAIASKVEYYWDAEENRVSTDDTLDKVTHKLGIGSIEKKGLTTDNIKDIEANKTAVI
KANFTSKTTPLELRYPDYKNVIGNAQEEVRGTVGDAITEMYMTIQKNNTGYFITYESVDG
SYKTTKKYYNPKALEYLDSENVYAGFFAARNANVTFSDISITTSNPATDPAPEERPIELI
AVNTKVQSPSATGTPDYTFAFTANCDGKLSIADKDGNFIAEDVEVKAKTAVNAANVVLNK
GKNDFKLYFTPAEGYIPGEYMAMQSYETKEIDFTVTYKTIGEAGQSIWVAPDAKGSGSKE
DPMSIYDAVKYVQPSQQIVLMEGTYKLESSLKIARGINGTAENMIYMVADPAATTRPVLD
FQELSTGMIIGGDYWYFKGFDVTRSANAQKGIQVSGNHNTLDQINAYHNGNTGIQISRLN
STDEYENWPSYNLILNCTSYGNADAGYEDADGFAAKLTVGDGNVFDGCIAHHNADDGWDL
FAKVQTGSIGVVTIKNSIAYANGYLEDGTDAGNGNGFKMGGDSMPGAHVLDNCISFCNKA
KGIDSNSCPDIKIKNSTSIDNESYNVALYTKTAENTDYEATGIISYRTGFDSDTVARTAG
LNVKEDLEPKGTQDIKKIYKTTNYFWDTASKTSVNSEGATVSTDWFKSLDYSAILDGVKS
VGTITRNADGTIALGDVFALTDKAPAGVGADFSHDKLTASVSPVIGESVTTGDTSNIAFL
LALFLMSGAAIAAVCIYDRKRRIVK

Enzyme Prediction     

No EC number prediction in MGYG000004317_01522.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL9	644	1043	1.6e-122	0.9786666666666667

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
smart00060	FN3	2.07e-06	176	243	3	77	Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
pfam00041	fn3	2.89e-06	176	246	2	79	Fibronectin type III domain.
cd00063	FN3	4.31e-06	176	243	3	77	Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
pfam13229	Beta_helix	0.003	747	863	44	138	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229	Beta_helix	0.004	790	936	9	128	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ABX44216.1	0.0	6	1076	150	1217
BCJ94249.1	4.78e-271	76	1075	223	1214
ADL35206.1	1.28e-238	18	1050	1401	2452
ACR71158.1	2.86e-217	76	1057	616	1651
QAA19010.1	3.25e-181	239	1063	63	887

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1RU4_A	2.72e-39	648	921	18	292	ChainA, Pectate lyase [Dickeya chrysanthemi]
5OLQ_A	3.15e-14	644	926	2	325	Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P22751	2.66e-61	292	925	76	643	Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1
P0C1A6	1.22e-39	648	921	43	317	Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7	2.47e-38	648	921	43	317	Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000073	0.000008	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

start	end
1075	1097