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CAZyme Information: MGYG000004317_01864

You are here: Home > Sequence: MGYG000004317_01864

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lachnospira sp900316325
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; Lachnospira sp900316325
CAZyme ID MGYG000004317_01864
CAZy Family GH3
CAZyme Description Xylan 1,4-beta-xylosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
848 91764.98 5.2356
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004317 2482422 MAG Israel Asia
Gene Location Start: 36062;  End: 38608  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004317_01864.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 78 294 8.8e-58 0.9074074074074074

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN03080 PLN03080 9.43e-96 45 843 41 733
Probable beta-xylosidase; Provisional
PRK15098 PRK15098 7.89e-77 45 843 23 716
beta-glucosidase BglX.
COG1472 BglX 1.29e-51 64 455 1 389
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam01915 Glyco_hydro_3_C 3.30e-35 402 774 2 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
pfam00933 Glyco_hydro_3 4.01e-34 93 286 73 254
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUO19977.1 0.0 52 843 230 1023
AUO18582.1 3.19e-299 42 843 58 853
AUO19701.1 4.03e-299 28 847 16 831
QUT75533.1 1.70e-141 45 843 41 817
QIA08073.1 3.57e-129 46 843 33 819

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7VC7_A 2.55e-66 56 843 25 683
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
7VC6_A 2.55e-66 56 843 25 683
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
5Z87_A 1.30e-58 36 845 28 738
ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus]
5A7M_A 1.39e-58 48 843 44 707
ChainA, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
5AE6_A 1.41e-58 48 843 44 707
ChainA, BETA-XYLOSIDASE [Trichoderma reesei],5AE6_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
D5EY15 5.77e-90 35 843 13 810
Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1
A5JTQ2 5.97e-73 25 841 33 726
Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago sativa subsp. varia OX=36902 GN=Xyl1 PE=1 SV=1
Q9LJN4 6.73e-73 48 840 43 719
Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana OX=3702 GN=BXL5 PE=2 SV=2
A5JTQ3 3.00e-68 28 840 36 725
Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia OX=36902 GN=Xyl2 PE=2 SV=1
Q94KD8 4.71e-67 40 843 38 714
Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000334 0.998998 0.000189 0.000175 0.000150 0.000133

TMHMM  Annotations      download full data without filtering help

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