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CAZyme Information: MGYG000004321_00562

You are here: Home > Sequence: MGYG000004321_00562

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Streptococcus constellatus
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus constellatus
CAZyme ID MGYG000004321_00562
CAZy Family GT0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
586 MGYG000004321_4|CGC1 69754.12 7.0056
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004321 1789116 MAG Israel Asia
Gene Location Start: 17474;  End: 19234  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004321_00562.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3754 RgpF 0.0 1 582 1 592
Lipopolysaccharide biosynthesis protein [Cell wall/membrane/envelope biogenesis].
pfam05045 RgpF 0.0 34 515 1 500
Rhamnan synthesis protein F. This family consists of a group of proteins which are related to the Streptococcus rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O polysaccharides of phytopathogenic bacteria and are regarded as pathogenic factors.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VEE19593.1 2.54e-252 1 583 1 580
VED67427.1 2.54e-252 1 583 1 580
QEW09567.1 1.46e-251 1 583 1 580
SQH66670.1 2.93e-251 1 583 1 580
SQF25488.1 4.16e-251 1 580 1 577

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P55470 5.82e-13 20 189 96 258
Uncharacterized protein y4gN OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a03500 PE=4 SV=1
B0RVK2 5.40e-12 290 509 449 659
Uncharacterized protein WxcX OS=Xanthomonas campestris pv. campestris (strain B100) OX=509169 GN=wxcX PE=4 SV=1
P0C7J1 9.42e-12 290 509 449 659
Uncharacterized protein WxcX OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=wxcX PE=4 SV=1
F7YJG6 3.34e-10 54 216 78 231
Virulence protein VirA OS=Vibrio anguillarum (strain ATCC 68554 / 775) OX=882102 GN=virA PE=4 SV=2
P0DJH1 3.34e-10 54 216 78 231
Virulence protein VirA OS=Vibrio anguillarum OX=55601 GN=virA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000053 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004321_00562.