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CAZyme Information: MGYG000004341_00101

You are here: Home > Sequence: MGYG000004341_00101

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-110 sp000435995
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; CAG-110; CAG-110 sp000435995
CAZyme ID MGYG000004341_00101
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
379 MGYG000004341_1|CGC2 42948.28 6.3089
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004341 2568452 MAG Israel Asia
Gene Location Start: 112971;  End: 114110  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004341_00101.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 27 347 3.5e-31 0.9107692307692308

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.33e-21 19 228 99 342
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 3.79e-06 92 223 39 176
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03010 PLN03010 1.93e-05 117 246 137 278
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUC03291.1 2.86e-106 19 377 18 380
AEB07770.1 6.71e-105 1 338 2 342
AUJ85227.1 1.05e-97 19 373 24 376
QED59087.1 1.27e-91 13 329 19 337
QFR62944.1 6.04e-85 17 329 22 336

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000056 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004341_00101.