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CAZyme Information: MGYG000004345_00134

You are here: Home > Sequence: MGYG000004345_00134

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Streptococcus thermophilus
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus thermophilus
CAZyme ID MGYG000004345_00134
CAZy Family GT0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
581 MGYG000004345_1|CGC2 68492.26 6.0415
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004345 1760385 MAG Israel Asia
Gene Location Start: 124762;  End: 126507  Strand: +

Full Sequence      Download help

MERLLLYVHY  NKFNFISGYV  LYQLEKIRPL  YSRVVFISNS  QLPEDVKDHL  SNQQLVDDIL60
ERQNSGFDFA  AWRDGMKTVG  FDQLSHFDSV  TLMNDTCFGP  LWDLESIYQQ  FENDLEVDFW120
GMTNYRKDKD  FNEHIQSYYL  SFKKQVIESC  SFHEFWQGVQ  DFTNVQDVID  NYETKITTNF180
LDAGFRYKTV  FHTIHEDTTG  MLHPDFSYYN  PTAILKHKVP  FIKVKSIANN  QGIMPYIFDE240
LERLSDYPLD  LILNHMSMID  RPDYPYLLSR  KYLKNQELTG  DFDKKVAVHL  HVFYVDLLEE300
FLDAFQYFHF  AYDLWITTDI  EEKKQEIEQI  LSRRSQDATI  VVTGNIGRDV  LPMLLLKEKL360
SRYDYVGHFH  TKKSKEADFW  AGESWRKELI  DMLVKPADQI  LANMEANPKV  GITIGDIPTY420
FRYNRIVVAW  NEALISPEMN  KLWQRMGATK  NIDFKNLNTF  VMSYGTFVWF  KYDALKPLFD480
LNLTVSDVPA  EPLPQNSILH  AIERLLVYIA  WDQKYDFRIS  QNPHVLTPFI  DNKQLNNRED540
LQPHTFVDFN  QIGGIKGALK  YIVIGPARAV  KYILKRLLSR  K581

Enzyme Prediction      help

No EC number prediction in MGYG000004345_00134.

CDD Domains      download full data without filtering help

Created with Snap2958871161451742032322612903193483774064354644935225511577RgpF34512RgpF
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3754 RgpF 0.0 1 577 1 590
Lipopolysaccharide biosynthesis protein [Cell wall/membrane/envelope biogenesis].
pfam05045 RgpF 0.0 34 512 1 500
Rhamnan synthesis protein F. This family consists of a group of proteins which are related to the Streptococcus rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O polysaccharides of phytopathogenic bacteria and are regarded as pathogenic factors.

CAZyme Hits      help

Created with Snap2958871161451742032322612903193483774064354644935225511581QBS00073.1|GT01581QBS00405.1|GT01581QHD71849.1|GT01581CAD0174269.1|GT01581CAD0177986.1|GT0
Hit ID E-Value Query Start Query End Hit Start Hit End
QBS00073.1 0.0 1 581 1 581
QBS00405.1 0.0 1 581 1 581
QHD71849.1 0.0 1 581 1 581
CAD0174269.1 0.0 1 581 1 581
CAD0177986.1 0.0 1 581 1 581

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Created with Snap295887116145174203232261290319348377406435464493522551287506sp|B0RVK2|WXCX_XANCB23191sp|P55470|Y4GN_SINFN287506sp|P0C7J1|WXCX_XANCP
Hit ID E-Value Query Start Query End Hit Start Hit End Description
B0RVK2 2.31e-12 287 506 449 659
Uncharacterized protein WxcX OS=Xanthomonas campestris pv. campestris (strain B100) OX=509169 GN=wxcX PE=4 SV=1
P55470 4.30e-12 23 191 99 264
Uncharacterized protein y4gN OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a03500 PE=4 SV=1
P0C7J1 7.01e-12 287 506 449 659
Uncharacterized protein WxcX OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=wxcX PE=4 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000064 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004345_00134.