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CAZyme Information: MGYG000004347_00003
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UBA5884 sp900551505 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; UBA5884; UBA5884 sp900551505 | |||||||||||
| CAZyme ID | MGYG000004347_00003 | |||||||||||
| CAZy Family | CBM4 | |||||||||||
| CAZyme Description | Cellulose 1,4-beta-cellobiosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 3142; End: 5832 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH9 | 302 | 790 | 9.3e-123 | 0.9904306220095693 |
| CBM4 | 35 | 178 | 1.1e-29 | 0.9841269841269841 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00759 | Glyco_hydro_9 | 8.90e-97 | 304 | 790 | 1 | 373 | Glycosyl hydrolase family 9. |
| cd02850 | E_set_Cellulase_N | 5.91e-29 | 214 | 297 | 2 | 86 | N-terminal Early set domain associated with the catalytic domain of cellulase. E or "early" set domains are associated with the catalytic domain of cellulases at the N-terminal end. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually categorized into either exoglucanases, which sequentially release terminal sugar units from the cellulose chain, or endoglucanases, which also attack the chain internally. The N-terminal domain of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. |
| pfam02927 | CelD_N | 6.38e-27 | 212 | 292 | 1 | 83 | Cellulase N-terminal ig-like domain. |
| pfam02018 | CBM_4_9 | 2.00e-14 | 40 | 181 | 8 | 134 | Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. |
| PLN02909 | PLN02909 | 2.36e-13 | 361 | 744 | 75 | 427 | Endoglucanase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ADU21576.1 | 1.55e-306 | 11 | 793 | 12 | 798 |
| QTL97152.1 | 6.59e-300 | 29 | 794 | 34 | 802 |
| AGF55629.1 | 2.78e-282 | 29 | 811 | 30 | 818 |
| CUH93326.1 | 4.85e-281 | 30 | 794 | 41 | 790 |
| QNU67291.1 | 5.09e-278 | 31 | 794 | 38 | 788 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1UT9_A | 1.41e-188 | 213 | 794 | 6 | 604 | ChainA, CELLULOSE 1,4-BETA-CELLOBIOSIDASE [Acetivibrio thermocellus] |
| 1RQ5_A | 1.64e-187 | 213 | 794 | 6 | 604 | ChainA, Cellobiohydrolase [Acetivibrio thermocellus] |
| 6DHT_A | 8.93e-68 | 214 | 787 | 18 | 557 | Bacteroidesovatus GH9 Bacova_02649 [Bacteroides ovatus ATCC 8483] |
| 4CJ0_A | 7.42e-63 | 214 | 797 | 30 | 551 | ChainA, ENDOGLUCANASE D [Acetivibrio thermocellus],4CJ1_A Chain A, ENDOGLUCANASE D [Acetivibrio thermocellus] |
| 1CLC_A | 9.66e-63 | 214 | 797 | 44 | 565 | ChainA, ENDOGLUCANASE CELD; EC: 3.2.1.4 [Acetivibrio thermocellus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A3DCH1 | 6.83e-230 | 33 | 794 | 40 | 811 | Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celK PE=3 SV=1 |
| P0C2S1 | 6.83e-230 | 33 | 794 | 40 | 811 | Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus OX=1515 GN=celK PE=1 SV=1 |
| Q05156 | 5.90e-164 | 2 | 793 | 1 | 741 | Cellulase 1 OS=Streptomyces reticuli OX=1926 GN=cel1 PE=1 SV=1 |
| P10476 | 5.83e-151 | 217 | 793 | 40 | 597 | Endoglucanase A OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=celA PE=3 SV=2 |
| P14090 | 4.75e-149 | 34 | 794 | 183 | 907 | Endoglucanase C OS=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) OX=590998 GN=cenC PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.104059 | 0.886848 | 0.007278 | 0.000775 | 0.000432 | 0.000568 |