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CAZyme Information: MGYG000004348_01241

You are here: Home > Sequence: MGYG000004348_01241

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella;
CAZyme ID MGYG000004348_01241
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
591 MGYG000004348_10|CGC1 64521.83 4.6565
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004348 1551350 MAG Israel Asia
Gene Location Start: 27501;  End: 29276  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004348_01241.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 75 280 1.4e-72 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 1.34e-06 37 253 49 276
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 0.004 73 239 1 185
Amb_all domain.
pfam18884 TSP3_bac 0.006 467 488 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNT67774.1 5.25e-257 24 591 5 586
AGB28243.1 4.81e-232 22 581 21 570
VEH16322.1 1.40e-225 16 543 22 539
QCD40778.1 4.14e-220 11 591 7 598
QCP73827.1 4.14e-220 11 591 7 598

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q0CLG7 2.03e-42 25 514 22 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
A1DPF0 1.42e-41 7 514 3 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B0XMA2 1.95e-41 7 514 3 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 3.70e-41 11 514 7 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B8NQQ7 8.82e-40 25 514 22 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000270 0.999063 0.000166 0.000166 0.000172 0.000146

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004348_01241.