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CAZyme Information: MGYG000004384_00613

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Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus;
CAZyme ID MGYG000004384_00613
CAZy Family CBM23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1311 MGYG000004384_26|CGC1 142660.96 4.2352
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004384 2222403 MAG Israel Asia
Gene Location Start: 6036;  End: 9971  Strand: +

Full Sequence      Download help

Enzyme Prediction      help


CAZyme Signature Domains help

Family Start End Evalue family coverage
GH5 212 458 1.1e-76 0.9802371541501976
GH5 915 1168 6e-72 0.9762845849802372
CBM23 32 175 1.4e-30 0.9074074074074074

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00150 Cellulase 8.54e-31 915 1167 3 272
Cellulase (glycosyl hydrolase family 5).
pfam00150 Cellulase 6.79e-25 211 457 1 272
Cellulase (glycosyl hydrolase family 5).
pfam03425 CBM_11 1.21e-08 31 148 5 128
Carbohydrate binding domain (family 11).
cd14256 Dockerin_I 5.01e-05 1235 1301 2 57
Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QKS47268.1 3.66e-118 204 866 414 1235
CCO04360.1 5.12e-88 204 500 41 335
QJU43361.1 2.20e-87 886 1202 20 328
QGH23260.1 2.20e-87 886 1202 20 328
QCJ05579.1 2.20e-87 886 1202 20 328

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUG_A 1.93e-83 898 1202 18 312
Crystalstructure of endo-beta-1,4-mannanase from the alkaliphilic Bacillus sp. N16-5 [Bacillus sp. N16-5]
1WKY_A 1.41e-82 204 669 11 450
Crystalstructure of alkaline mannanase from Bacillus sp. strain JAMB-602: catalytic domain and its Carbohydrate Binding Module [Bacillus sp. JAMB-602]
2WHJ_A 3.31e-81 903 1202 1 290
Understandinghow diverse mannanases recognise heterogeneous substrates [Salipaludibacillus agaradhaerens]
2WHL_A 1.02e-80 904 1202 1 287
Understandinghow diverse mannanases recognise heterogeneous substrates [Salipaludibacillus agaradhaerens]
1BQC_A 4.61e-58 203 495 4 298
Beta-MannanaseFrom Thermomonospora Fusca [Thermobifida fusca],2MAN_A Mannotriose Complex Of Thermomonospora Fusca Beta-Mannanase [Thermobifida fusca],3MAN_A Mannohexaose Complex Of Thermomonospora Fusca Beta-mannanase [Thermobifida fusca]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
G1K3N4 1.81e-80 903 1202 1 290
Mannan endo-1,4-beta-mannosidase OS=Salipaludibacillus agaradhaerens OX=76935 PE=1 SV=1
P51529 1.51e-53 897 1202 32 329
Mannan endo-1,4-beta-mannosidase OS=Streptomyces lividans OX=1916 GN=manA PE=1 SV=2
B3PF24 1.03e-51 861 1217 7 357
Mannan endo-1,4-beta-mannosidase OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=man5A PE=1 SV=1
P22533 2.71e-49 222 491 55 326
Beta-mannanase/endoglucanase A OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=manA PE=1 SV=2
Q53317 1.57e-18 1235 1308 439 512
Xylanase/beta-glucanase OS=Ruminococcus flavefaciens OX=1265 GN=xynD PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

0.000321 0.998955 0.000176 0.000186 0.000170 0.000154

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004384_00613.