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CAZyme Information: MGYG000004402_00973

You are here: Home > Sequence: MGYG000004402_00973

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RC9 sp000432515
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp000432515
CAZyme ID MGYG000004402_00973
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
747 81876.13 4.5571
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004402 3046184 MAG Israel Asia
Gene Location Start: 58819;  End: 61062  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004402_00973.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 451 728 7e-33 0.7476923076923077

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.67e-20 320 667 28 398
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 1.78e-10 503 724 94 274
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03010 PLN03010 9.85e-08 503 725 166 363
polygalacturonase
PLN02793 PLN02793 2.23e-05 507 702 190 366
Probable polygalacturonase
PLN03003 PLN03003 3.54e-05 436 667 105 291
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRP58902.1 5.48e-215 44 745 62 772
QQA09745.1 5.48e-215 44 745 62 772
QQT79214.1 5.48e-215 44 745 62 772
ASW16403.1 5.48e-215 44 745 62 772
SCM58771.1 1.19e-129 285 747 58 511

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1DAX2 6.54e-07 462 723 141 406
Probable exopolygalacturonase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgxB PE=3 SV=1
B0YAA4 1.51e-06 462 723 141 406
Probable exopolygalacturonase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pgxB PE=3 SV=2
Q4WBK6 1.51e-06 462 723 141 406
Probable exopolygalacturonase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgxB PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000157 0.016456 0.983274 0.000032 0.000074 0.000022

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004402_00973.