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CAZyme Information: MGYG000004408_00839

You are here: Home > Sequence: MGYG000004408_00839

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella;
CAZyme ID MGYG000004408_00839
CAZy Family GH170
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
350 MGYG000004408_46|CGC1 38028.14 4.922
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004408 2107526 MAG Israel Asia
Gene Location Start: 10413;  End: 11465  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004408_00839.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH170 3 349 9.9e-101 0.9914285714285714

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam19200 DUF871_N 9.60e-78 4 233 2 235
DUF871 N-terminal domain. This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown.
COG3589 COG3589 2.94e-66 1 350 2 357
Uncharacterized protein [Function unknown].
pfam05913 DUF871 5.17e-25 239 350 5 116
Bacterial protein of unknown function (DUF871). This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown.
COG4070 COG4070 0.001 222 344 190 306
Uncharacterized protein, methanogenesis marker protein 3, UPF0288 family [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP53905.1 6.51e-247 1 350 1 350
QIA33651.1 3.77e-246 1 350 1 350
AZH69275.1 4.21e-243 1 350 1 350
QOY60728.1 1.31e-144 1 350 1 351
ADL06294.1 2.64e-119 1 350 1 349

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2P0O_A 8.78e-55 4 344 6 352
Crystalstructure of a conserved protein from locus EF_2437 in Enterococcus faecalis with an unknown function [Enterococcus faecalis V583]
1X7F_A 3.04e-23 2 341 28 375
Crystalstructure of an uncharacterized B. cereus protein [Bacillus cereus ATCC 14579]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A0A0H2XHV5 1.59e-32 3 342 2 336
6-phospho-N-acetylmuramidase OS=Staphylococcus aureus (strain USA300) OX=367830 GN=mupG PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000050 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004408_00839.