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CAZyme Information: MGYG000004429_00803

You are here: Home > Sequence: MGYG000004429_00803

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; CAG-274; ;
CAZyme ID MGYG000004429_00803
CAZy Family PL9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
813 84998.15 9.6859
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004429 2352873 MAG Israel Asia
Gene Location Start: 5448;  End: 7889  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004429_00803.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 420 782 1.4e-54 0.820855614973262

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13229 Beta_helix 0.007 485 558 65 140
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBZ48778.1 4.62e-111 218 806 37 604
BAK28435.1 4.62e-111 218 806 37 604
QKI00169.1 4.62e-111 218 806 37 604
QWX86240.1 4.62e-111 218 806 37 604
CBI14069.1 3.52e-110 218 806 37 604

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 2.41e-10 537 741 155 296
ChainA, Pectate lyase [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C1A6 4.72e-10 537 741 180 321
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7 1.45e-09 537 741 180 321
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000470 0.998711 0.000177 0.000255 0.000194 0.000172

TMHMM  Annotations      download full data without filtering help

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7 29