CAZyme Information: MGYG000004443_00512

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Coprobacteraceae
• CAZyme ID: MGYG000004443_00512
• CAZy Family: GH3
• CAZyme Description: Beta-hexosaminidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
992	MGYG000004443_11|CGC1	110789.7	8.9565

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004443	2430140	MAG	Israel	Asia

• Gene Location: Start: 12477; End: 15455 Strand: -

Full Sequence      

MRNLFLLLFFCVYLFPVSARVQVNLYQSVDSAGMNAWVDSVFDSMTLEERIGQLFVLGVD
VSTSQNNKIILKNYVENLKIGGILFTHGTARDQAELTNYGQSLAKVPLLITLDGEWGLSM
RLRDTPRFPINMMLGAIDNDSLIYQYGKEVGRECRLMGIHVNFAPVMDVNSNPDNPVIGK
RSFGEEVEQVTRRALLYAKGLESEGVMSVAKHFPGHGDTSDDSHKTMPVVTHDTARLKSC
ELYPFKRFIDEGFSGVMVGHLFVPALDSETKRPASLSPLVIDSLLRRQMGFDGLVFTDAL
EMKGVADNENMVVNAVLAGNDILLKPENPLSQVKLLINAVKLGIVPQQVIEDRCLRILRY
KYCLGLNKLKPVTTRNITSRLHTADTEYLNRRLNESAVTLLENKGEILPLKQLAERKIAV
LSIGENSETPFQKMIKQYAPVTCFLIDYKTTMAAKKQILSQLAGYNTVIVGVHSSHSRYA
TLIETLGKEKNVIFSFFTPPYHLLNVQKVKFSNAVIMAYENTDLAQEYAAQAIFGGIGFK
GKLPVTLKGLYAFGTGLNTEATRLGYTVPEEVGMSSEKLKEIDKIVQEALQERAFPGCQV
LIARKGKIVYNKPFGYFDYAGTKPVENSDVYDLASVTKATATLPAVMKMVDQGLMRVDTF
LSTYIPQMKGTDKEKIKVADALFHESGMIPTLATYNVVIDTASYSGPLFRNKQDATYRLQ
ADRRLFANKNIRMRKELISSEPKPGYPLTIAQNMYGVASLPDTLLKAIIETKLGKPKKYV
YSCLNFSLLKTAVQNVSHMPIDSLVEKYYFAPLGAQTTMYRPLRRIPATSIAPTEHDHFM
RNQILIGYVHDEMSAFCGGVEGNAGLFSSANDLAKLLQLYLNEGSYGGEQYVSQKTAHRF
VTQTSTVSRRGLGFDKPDKKNENNSPACPEASEKAYGHYGYTGTAFWVDPANETIYIFLC
NRVYPNRWNNKLSSLDIRTRIHSAMYQAITQP

Enzyme Prediction     

No EC number prediction in MGYG000004443_00512.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	101	324	5.7e-58	0.9768518518518519

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG1472	BglX	2.01e-87	45	422	1	361	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933	Glyco_hydro_3	3.41e-79	46	359	1	315	Glycosyl hydrolase family 3 N terminal domain.
PRK03642	PRK03642	1.12e-52	569	962	30	395	putative periplasmic esterase; Provisional
PRK05337	PRK05337	8.91e-42	80	370	26	317	beta-hexosaminidase; Provisional
pfam00144	Beta-lactamase	1.09e-39	582	967	1	313	Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCI64113.1	0.0	3	989	5	993
QCY58561.1	0.0	1	989	1	991
QKH98636.1	0.0	1	989	1	991
QUT21701.1	0.0	1	989	1	991
QUT55768.1	0.0	1	989	1	991

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3BMX_A	6.61e-71	39	563	36	640	Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
4GYJ_A	1.41e-70	14	563	14	644	Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]
3LK6_A	1.86e-70	39	563	10	614	ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
6K5J_A	9.63e-63	44	547	10	531	Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]
3SQL_A	3.87e-52	80	361	58	346	CrystalStructure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQL_B Crystal Structure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQM_A Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_B Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_C Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_D Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P40406	3.62e-70	39	563	36	640	Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
Q7WUL3	1.01e-43	28	545	10	553	Beta-N-acetylglucosaminidase/beta-glucosidase OS=Cellulomonas fimi OX=1708 GN=nag3 PE=1 SV=1
P48823	4.03e-43	71	415	55	430	Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1
B5RCU8	1.08e-37	569	973	30	406	Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) OX=550538 GN=yfeW PE=3 SV=1
B5F0K5	1.46e-37	569	973	30	406	Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella agona (strain SL483) OX=454166 GN=yfeW PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000228	0.999172	0.000160	0.000141	0.000136	0.000131

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004443_00512.