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CAZyme Information: MGYG000004445_00210

You are here: Home > Sequence: MGYG000004445_00210

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Borkfalkiaceae; ;
CAZyme ID MGYG000004445_00210
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
803 89798.46 5.7732
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004445 2176712 MAG Israel Asia
Gene Location Start: 20832;  End: 23243  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004445_00210.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 368 632 7.9e-18 0.6184615384615385

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.18e-19 340 598 85 345
Polygalacturonase [Carbohydrate transport and metabolism].
pfam12708 Pectate_lyase_3 1.16e-04 340 373 4 37
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
PLN03003 PLN03003 0.001 484 639 141 271
Probable polygalacturonase At3g15720
PLN02155 PLN02155 0.008 338 582 28 244
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGA23464.1 9.96e-114 161 759 64 753
QCD41820.1 2.76e-88 95 710 129 841
ADB48561.1 1.77e-33 343 703 35 375
QNK58431.1 4.23e-18 338 555 4 205
ALJ05933.1 1.10e-17 329 557 20 230

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 9.87e-12 315 587 27 300
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
3JUR_A 1.06e-08 308 560 1 268
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
4MXN_A 1.14e-06 334 401 18 85
Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9ZFG9 6.03e-07 338 379 3 44
Alginate lyase 7 OS=Azotobacter vinelandii OX=354 GN=algE7 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000021 0.000032 0.000001 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004445_00210.