logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004457_00773

You are here: Home > Sequence: MGYG000004457_00773

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-485 sp900767075
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; CAG-485; CAG-485 sp900767075
CAZyme ID MGYG000004457_00773
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
598 65640.34 5.1822
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004457 2747221 MAG Israel Asia
Gene Location Start: 720;  End: 2516  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004457_00773.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 79 279 3.5e-71 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00656 Amb_all 1.17e-06 77 223 1 151
Amb_all domain.
COG3866 PelB 3.79e-06 11 222 15 235
Pectate lyase [Carbohydrate transport and metabolism].
pfam18884 TSP3_bac 6.13e-04 475 496 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD40778.1 4.35e-287 1 598 1 599
QCP73827.1 4.35e-287 1 598 1 599
QNT67774.1 1.88e-217 24 597 5 586
VEH16322.1 9.48e-198 23 574 27 551
AGB28243.1 1.76e-195 2 559 4 544

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FI2_A 1.03e-07 30 233 46 254
VexL:A periplasmic depolymerase provides new insight into ABC transporter-dependent secretion of bacterial capsular polysaccharides [Achromobacter denitrificans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 6.53e-44 25 521 22 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q0CLG7 4.24e-42 25 521 22 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
Q2UB83 4.24e-42 25 521 22 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
A1DPF0 1.06e-40 25 521 23 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q5B297 2.80e-40 25 523 22 413
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000233 0.999002 0.000180 0.000205 0.000183 0.000162

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004457_00773.