logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004461_01797

You are here: Home > Sequence: MGYG000004461_01797

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; ;
CAZyme ID MGYG000004461_01797
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1083 122129.95 9.6191
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004461 4658877 MAG Israel Asia
Gene Location Start: 84200;  End: 87451  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004461_01797.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 326 508 2.6e-27 0.4408352668213457

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd09621 CBM9_like_5 6.60e-28 772 940 30 188
DOMON-like type 9 carbohydrate binding module. Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. CBM9 domains found in this uncharacterized heterogeneous subfamily are often located at the C-terminus of longer proteins and may co-occur with various other functional domains such as glycosyl hydrolases. The CBM9 module in these architectures may be involved in binding to carbohydrates.
pfam01229 Glyco_hydro_39 2.90e-08 329 488 46 209
Glycosyl hydrolases family 39.
smart00633 Glyco_10 1.82e-06 341 466 3 121
Glycosyl hydrolase family 10.
pfam02449 Glyco_hydro_42 2.88e-05 319 482 12 184
Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.
cd00241 DOMON_like 5.69e-04 753 922 1 158
Domon-like ligand-binding domains. DOMON-like domains can be found in all three kindgoms of life and are a diverse group of ligand binding domains that have been shown to interact with sugars and hemes. DOMON domains were initially thought to confer protein-protein interactions. They were subsequently found as a heme-binding motif in cellobiose dehydrogenase, an extracellular fungal oxidoreductase that degrades both lignin and cellulose, and in ethylbenzene dehydrogenase, an enzyme that aids in the anaerobic degradation of hydrocarbons. The domain interacts with sugars in the type 9 carbohydrate binding modules (CBM9), which are present in a variety of glycosyl hydrolases, and it can also be found at the N-terminus of sensor histidine kinases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM45582.1 7.59e-163 175 1078 25 915
AVM45605.1 2.13e-122 53 938 221 1091
BBH20281.1 1.72e-104 136 936 182 970
BBH24554.1 4.67e-101 55 940 261 1137
AHF94113.1 1.18e-95 183 938 231 982

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4ZN2_A 1.06e-14 329 545 45 250
Glycosylhydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_B Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_C Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_D Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1]
5BX9_A 1.06e-14 329 545 45 250
Structureof PslG from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],5BXA_A Structure of PslG from Pseudomonas aeruginosa in complex with mannose [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.004290 0.990674 0.004413 0.000219 0.000198 0.000193

TMHMM  Annotations      download full data without filtering help

start end
7 25