You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000004462_00089
You are here: Home > Sequence: MGYG000004462_00089
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; | |||||||||||
| CAZyme ID | MGYG000004462_00089 | |||||||||||
| CAZy Family | PL1 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 135011; End: 136840 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 82 | 274 | 2.8e-63 | 0.9890710382513661 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3866 | PelB | 4.56e-06 | 23 | 290 | 28 | 279 | Pectate lyase [Carbohydrate transport and metabolism]. |
| smart00656 | Amb_all | 8.78e-05 | 76 | 224 | 3 | 151 | Amb_all domain. |
| pfam00544 | Pec_lyase_C | 0.001 | 97 | 226 | 35 | 178 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
| pfam18884 | TSP3_bac | 0.009 | 499 | 520 | 1 | 22 | Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUT75604.1 | 2.39e-148 | 25 | 543 | 38 | 534 |
| QNA45667.1 | 1.56e-92 | 25 | 543 | 24 | 461 |
| ALJ01754.1 | 1.43e-90 | 20 | 542 | 14 | 461 |
| QGW28869.1 | 2.90e-89 | 14 | 539 | 13 | 457 |
| AEV99914.1 | 5.72e-88 | 25 | 541 | 31 | 468 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6FI2_A | 4.80e-09 | 30 | 275 | 46 | 272 | VexL:A periplasmic depolymerase provides new insight into ABC transporter-dependent secretion of bacterial capsular polysaccharides [Achromobacter denitrificans] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q5B297 | 5.08e-29 | 1 | 541 | 4 | 410 | Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1 |
| B8NQQ7 | 1.23e-28 | 25 | 545 | 22 | 417 | Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1 |
| Q4WL88 | 1.24e-28 | 25 | 541 | 23 | 414 | Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1 |
| B0XMA2 | 1.68e-28 | 25 | 541 | 23 | 414 | Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1 |
| A1DPF0 | 2.55e-27 | 25 | 541 | 23 | 414 | Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000197 | 0.999175 | 0.000157 | 0.000172 | 0.000159 | 0.000142 |