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CAZyme Information: MGYG000004462_00575
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; | |||||||||||
| CAZyme ID | MGYG000004462_00575 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 58269; End: 59582 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 71 | 416 | 5.3e-53 | 0.9323076923076923 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 4.70e-40 | 22 | 363 | 47 | 413 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN02188 | PLN02188 | 4.90e-10 | 49 | 333 | 39 | 292 | polygalacturonase/glycoside hydrolase family protein |
| PLN02218 | PLN02218 | 9.15e-09 | 45 | 388 | 66 | 412 | polygalacturonase ADPG |
| pfam00295 | Glyco_hydro_28 | 1.82e-08 | 73 | 267 | 1 | 169 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03003 | PLN03003 | 9.67e-08 | 28 | 297 | 14 | 266 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QCD40899.1 | 1.52e-172 | 7 | 432 | 14 | 437 |
| QCP73439.1 | 2.09e-171 | 1 | 433 | 7 | 439 |
| QCD39791.1 | 2.09e-171 | 1 | 433 | 7 | 439 |
| BCS85374.1 | 8.35e-159 | 2 | 437 | 11 | 443 |
| BCS85035.1 | 1.43e-147 | 1 | 437 | 27 | 455 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5OLP_A | 2.87e-29 | 47 | 431 | 45 | 447 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 3JUR_A | 3.35e-24 | 46 | 436 | 27 | 435 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 2UVE_A | 3.52e-08 | 49 | 190 | 159 | 299 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P26216 | 2.03e-09 | 36 | 269 | 39 | 242 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1 |
| P35338 | 2.71e-09 | 36 | 269 | 39 | 242 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1 |
| P35339 | 3.60e-09 | 36 | 269 | 39 | 242 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1 |
| Q949Z1 | 2.29e-08 | 41 | 287 | 74 | 311 | Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV=1 |
| Q6H9K0 | 9.90e-08 | 40 | 333 | 3 | 265 | Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.781743 | 0.214971 | 0.002841 | 0.000177 | 0.000102 | 0.000166 |