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CAZyme Information: MGYG000004468_00272

You are here: Home > Sequence: MGYG000004468_00272

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes_A sp900539755
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes_A; Alistipes_A sp900539755
CAZyme ID MGYG000004468_00272
CAZy Family PL35
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
618 MGYG000004468_1|CGC4 69903.94 6.001
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004468 2418771 MAG Israel Asia
Gene Location Start: 332174;  End: 334030  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004468_00272.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL35 380 557 2.5e-64 0.9776536312849162

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16332 DUF4962 1.40e-09 17 240 123 362
Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940 Hepar_II_III 2.93e-08 395 565 39 207
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCG53903.1 0.0 1 614 1 615
QUT50613.1 7.14e-243 27 610 31 614
QGA22620.1 1.97e-242 9 617 9 618
AXY73442.1 2.60e-205 2 616 4 623
ARK12523.1 2.66e-202 27 606 33 612

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3A0O_A 3.23e-11 72 533 189 665
Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A 5.09e-10 72 533 189 665
Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000218 0.999138 0.000161 0.000162 0.000157 0.000141

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004468_00272.